undimensional_542533

http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_542533

undimensional_542533

統計解析結果（定量値）

control cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

• cohort_47994
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/47994

experimental cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

• cohort_40185
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/40185

project

http://purl.org/dc/elements/1.1/contributor

• IMPC
  http://metadb.riken.jp/db/IMPC_RDF/project/4

organization

http://purl.org/dc/elements/1.1/publisher

• Wellcome Trust Sanger Institute
  http://metadb.riken.jp/db/IMPC_RDF/Organization/3

pipeline

http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

• MGP Select Pipeline
  http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/MGP_001

procedure

http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

• Clinical Chemistry
  http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_CBC_001

parameter

http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

• Creatinine
  http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_CBC_005_001

colony

http://metadb.riken.jp/db/IMPC_RDF/measured_colony

• http://metadb.riken.jp/db/IMPC_RDF/Colony/DAAY

dependent_variable

http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

• IMPC_CBC_005_001

control_selection_strategy

http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

• baseline_all

mp_acc

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

male_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

• increased circulating creatinine level
  http://purl.obolibrary.org/obo/MP_0005553

female_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

• decreased circulating creatinine level
  http://purl.obolibrary.org/obo/MP_0005554

male_controls

http://metadb.riken.jp/db/IMPC_RDF/male_controls

• 1945

male_mutants

http://metadb.riken.jp/db/IMPC_RDF/male_mutants

• 7

female_controls

http://metadb.riken.jp/db/IMPC_RDF/female_controls

• 1903

female_mutants

http://metadb.riken.jp/db/IMPC_RDF/female_mutants

• 7

female_control_mean

http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

• 0.16020487283237

male_control_mean

http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

• 0.12814564874036

female_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

• 0.153857142857143

male_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

• 0.158714285714286

metadata_group

http://metadb.riken.jp/db/IMPC_RDF/metadata_group

• d307adf61223cf1c546130cb9f701bdd

stat_method

http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

• Mixed Model framework, linear mixed-effects model, equation withWeight
  http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withWeight

workflow

http://metadb.riken.jp/db/IMPC_RDF/workflow

• low_batch

weight_available

http://metadb.riken.jp/db/IMPC_RDF/weight_available

status

http://metadb.riken.jp/db/IMPC_RDF/status

• Success

batch_significance

http://metadb.riken.jp/db/IMPC_RDF/batch_significance

• 1

variance_significance

http://metadb.riken.jp/db/IMPC_RDF/variance_significance

• 1

null_test_significance

http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

• 0.0471608035901253

genotype_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change

http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

• Female: -6.76%, Male: 16.57%

gender_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

• -0.035244995037966

gender_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

• 0.00126583655785254

gender_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

• 2.31228005488178e-154

weight_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

• 0.000447331600165999

weight_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

• 0.000146473751352249

weight_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

• 0.00227498553118044

gp1_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

• +/+

gp1_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

• 7.37e-10

gp2_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

• DAAY

gp2_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

• 0.100984170768817

blups_test

http://metadb.riken.jp/db/IMPC_RDF/blups_test

• 0.128793534977195

rotated_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

• 7.37e-10

intercept_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

• 0.149056255495961

intercept_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

• 0.0039112979120935

interaction_significance

http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

• 1

interaction_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

• 0.0286490999196836

gender_female_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

• -0.00973603146767553

gender_female_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

• 0.0131040039004726

gender_female_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

• 0.457542537034354

gender_male_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• 0.0238637992324425
• 0.0110574556303784

gender_male_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• 0.0238637992324425
• 0.0110574556303784

gender_male_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

• 0.0309825632796292

classification_tag

http://metadb.riken.jp/db/IMPC_RDF/classification_tag

• If phenotype is significant - males only

additional_information

http://metadb.riken.jp/db/IMPC_RDF/additional_information