undimensional_542552

http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_542552

undimensional_542552

統計解析結果（定量値）

control cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

• cohort_47994
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/47994

experimental cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

• cohort_40185
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/40185

project

http://purl.org/dc/elements/1.1/contributor

• IMPC
  http://metadb.riken.jp/db/IMPC_RDF/project/4

organization

http://purl.org/dc/elements/1.1/publisher

• Wellcome Trust Sanger Institute
  http://metadb.riken.jp/db/IMPC_RDF/Organization/3

pipeline

http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

• MGP Select Pipeline
  http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/MGP_001

procedure

http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

• Clinical Chemistry
  http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_CBC_001

parameter

http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

• Creatine kinase
  http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_CBC_028_001

colony

http://metadb.riken.jp/db/IMPC_RDF/measured_colony

• http://metadb.riken.jp/db/IMPC_RDF/Colony/DAAY

dependent_variable

http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

• IMPC_CBC_028_001

control_selection_strategy

http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

• baseline_all

mp_acc

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

• increased circulating creatine kinase level
  http://purl.obolibrary.org/obo/MP_0010090

male_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

female_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

male_controls

http://metadb.riken.jp/db/IMPC_RDF/male_controls

• 1880

male_mutants

http://metadb.riken.jp/db/IMPC_RDF/male_mutants

• 7

female_controls

http://metadb.riken.jp/db/IMPC_RDF/female_controls

• 1830

female_mutants

http://metadb.riken.jp/db/IMPC_RDF/female_mutants

• 7

female_control_mean

http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

• 338.658797814208

male_control_mean

http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

• 272.811595744681

female_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

• 405.514285714286

male_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

• 201.957142857143

metadata_group

http://metadb.riken.jp/db/IMPC_RDF/metadata_group

• d307adf61223cf1c546130cb9f701bdd

stat_method

http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

• Mixed Model framework, linear mixed-effects model, equation withWeight
  http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withWeight

workflow

http://metadb.riken.jp/db/IMPC_RDF/workflow

• low_batch

weight_available

http://metadb.riken.jp/db/IMPC_RDF/weight_available

status

http://metadb.riken.jp/db/IMPC_RDF/status

• Success

batch_significance

http://metadb.riken.jp/db/IMPC_RDF/batch_significance

• 1

variance_significance

http://metadb.riken.jp/db/IMPC_RDF/variance_significance

• 1

null_test_significance

http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

• 0.949887950067346

genotype_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

• 5.48688796081383

genotype_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

• 86.8283093087015

genotype_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

• 0.949617042841449

genotype_percentage_change

http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

• Female: 1.8%, Male: 1.8%

gender_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

• -34.5316193124441

gender_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

• 14.0427983023417

gender_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

• 0.0139811554463896

weight_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

• -5.07433915456694

weight_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

• 1.61576926446231

weight_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

• 0.00170109622728432

gp1_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

• +/+

gp1_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

• 7.37e-10

gp2_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

• DAAY

gp2_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

• 0.519903903405939

blups_test

http://metadb.riken.jp/db/IMPC_RDF/blups_test

• 2.12121118018834e-06

rotated_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

• 7.37e-10

intercept_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

• 471.901237664603

intercept_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

• 42.318090100867

interaction_significance

http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

• 0

interaction_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

• 0.447051513998126

gender_female_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

gender_female_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

gender_female_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

gender_male_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

classification_tag

http://metadb.riken.jp/db/IMPC_RDF/classification_tag

• If phenotype is significant - both sexes equally

additional_information

http://metadb.riken.jp/db/IMPC_RDF/additional_information