IMPC RDF data 統計解析結果（定量値）

undimensional_565009
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_565009

undimensional_565009(統計解析結果（定量値）)

URI表示モード

undimensional_565009

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_39069
http://metadb.riken.jp/db/IMPC_RDF/Cohort/39069

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_45640
http://metadb.riken.jp/db/IMPC_RDF/Cohort/45640

project http://purl.org/dc/elements/1.1/contributor

IMPC
http://metadb.riken.jp/db/IMPC_RDF/project/4

organization http://purl.org/dc/elements/1.1/publisher

University of California at Davis School of Veterinary Medicine
http://metadb.riken.jp/db/IMPC_RDF/Organization/2

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

UCD Pipeline
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/UCD_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Electrocardiogram (ECG)
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_ECG_001

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

RR
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_ECG_004_001

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/ET7865

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

IMPC_ECG_004_001

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

shortened RR interval
http://purl.obolibrary.org/obo/MP_0010507

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

743

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

8

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

746

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

8

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

79.8471849865952

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

78.1822341857335

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

80.0875

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

77.2375

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

7c23e60d0c7f479e065d88af67d60c55

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

0

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.515140981455463

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

-0.46676747361647

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

0.737080952550327

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

0.526711203377009

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: -0.59%, Male: -0.59%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

-2.09622375833202

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

0.266733462022611

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

1.03453147194101e-14

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

0.086271103568585

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

0.0373661868839895

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

0.0211658017412155

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

7.37e-10

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

ET7865

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.247399335263899

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

2.32104261611526e-09

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

7.37e-10

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

77.7461173513402

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

0.896720069382819

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

0

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.188705814504013

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - both sexes equally

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information