IMPC RDF data 統計解析結果（定量値）

undimensional_565853
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_565853

undimensional_565853(統計解析結果（定量値）)

URI表示モード

undimensional_565853

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_39069
http://metadb.riken.jp/db/IMPC_RDF/Cohort/39069

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_44805
http://metadb.riken.jp/db/IMPC_RDF/Cohort/44805

project http://purl.org/dc/elements/1.1/contributor

IMPC
http://metadb.riken.jp/db/IMPC_RDF/project/4

organization http://purl.org/dc/elements/1.1/publisher

University of California at Davis School of Veterinary Medicine
http://metadb.riken.jp/db/IMPC_RDF/Organization/2

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

UCD Pipeline
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/UCD_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Heart Weight
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_HWT_001

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Heart weight
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_HWT_008_001

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/BL5138

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

IMPC_HWT_008_001

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

increased heart weight
http://purl.obolibrary.org/obo/MP_0002833

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

decreased heart weight
http://purl.obolibrary.org/obo/MP_0002834

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

745

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

8

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

747

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

7

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

121.712449799197

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

147.655302013423

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

107.114285714286

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

142.0875

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

143fb23a68e55ef9da93f06d9dabe9ea

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

0

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.0162451279604294

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: -5.03%, Male: 3.34%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

12.6960782439298

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

1.06675579050369

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

1.21368375570471e-30

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

1.95446491614525

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

0.114579017558779

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

1.81783138131628e-57

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

7.37e-10

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

BL5138

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.615148605454571

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

1.17484308785599e-07

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

7.37e-10

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

71.404053757719

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

2.99959048822134

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

1

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.00159944436330128

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

-6.77364440443343

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

3.41063657976883

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

0.0473018267647886

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

3.49015240714458
4.49533561662116

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

3.49015240714458
4.49533561662116

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

0.198041697915512

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - females only

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information