IMPC RDF data 統計解析結果（定量値）

undimensional_57464
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_57464

undimensional_57464(統計解析結果（定量値）)

URI表示モード

undimensional_57464

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_39069
http://metadb.riken.jp/db/IMPC_RDF/Cohort/39069

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_46478
http://metadb.riken.jp/db/IMPC_RDF/Cohort/46478

project http://purl.org/dc/elements/1.1/contributor

IMPC
http://metadb.riken.jp/db/IMPC_RDF/project/4

organization http://purl.org/dc/elements/1.1/publisher

The Centre for Phenogenomics
http://metadb.riken.jp/db/IMPC_RDF/Organization/27

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

TCP Pipeline
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/TCP_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Body Composition (DEXA lean/fat)
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_DXA_001

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Fat/Body weight
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_DXA_009_001

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/TCPR0404_ACUB

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

IMPC_DXA_009_001

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

increased total body fat amount
http://purl.obolibrary.org/obo/MP_0010024

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

215

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

8

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

230

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

8

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

0.178276086956522

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

0.19655856744186

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

0.17316975

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

0.203714375

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

1f0313a8a852318ae73c07c4d6ff42e0

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withoutWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

1

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.919611010565914

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

0.00140363914866901

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

0.0140529887889225

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

0.920599394094482

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: 0.75%, Male: 0.75%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

0.0187995505030813

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

0.00297316999060916

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

8.21851433593945e-10

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

1.65092831638034e-05

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

TCPR0404_ACUB

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.82881322058797

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

0.0165227378855552

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

4.58021301940198e-08

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

0.181055991483367

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

0.00313423166478591

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

0

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.894497082569971

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - both sexes equally

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information