IMPC RDF data 統計解析結果（定量値）

undimensional_617288
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_617288

undimensional_617288(統計解析結果（定量値）)

URI表示モード

undimensional_617288

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_44388
http://metadb.riken.jp/db/IMPC_RDF/Cohort/44388

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_41959
http://metadb.riken.jp/db/IMPC_RDF/Cohort/41959

project http://purl.org/dc/elements/1.1/contributor

IMPC
http://metadb.riken.jp/db/IMPC_RDF/project/4

organization http://purl.org/dc/elements/1.1/publisher

Jackson Laboratory
http://metadb.riken.jp/db/IMPC_RDF/Organization/6

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

JAX Pipeline
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/JAX_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Hematology
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_HEM_001

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Hemoglobin
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_HEM_003_001

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/JR18631

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

IMPC_HEM_003_001

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

increased hemoglobin content
http://purl.obolibrary.org/obo/MP_0005564

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

increased hemoglobin content
http://purl.obolibrary.org/obo/MP_0005564

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

increased hemoglobin content
http://purl.obolibrary.org/obo/MP_0005564

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

9

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

6

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

9

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

6

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

13.6

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

13.1666666666667

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

14.35

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

14.0833333333333

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

464ff76455f839ff856e9770132596d1

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, generalized least squares, equation withoutWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_generalized_least_squares_equation_withoutWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

0

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

1

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.0102570050270587

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: 5.47%, Male: 6.68%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

-0.433333333333333

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

0.34768260077719

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

0.223749877304949

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

0.936069856883514

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

JR18631

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.576322423892669

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

13.6

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

0.245848724710126

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

1

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.0087691070148363

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

0.749999999999999

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

0.388720964965859

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

0.0646617536912959

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

0.916666666666666
0.388720964965859

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

0.916666666666666
0.388720964965859

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

0.0261661666056566

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - males only

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information