IMPC RDF data 統計解析結果（定量値）

undimensional_623489
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_623489

undimensional_623489(統計解析結果（定量値）)

URI表示モード

undimensional_623489

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_47994
http://metadb.riken.jp/db/IMPC_RDF/Cohort/47994

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_47034
http://metadb.riken.jp/db/IMPC_RDF/Cohort/47034

project http://purl.org/dc/elements/1.1/contributor

IMPC
http://metadb.riken.jp/db/IMPC_RDF/project/4

organization http://purl.org/dc/elements/1.1/publisher

Institut Clinique de la Souris
http://metadb.riken.jp/db/IMPC_RDF/Organization/8

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

ICS
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/ICS_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Eye Morphology
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_EYE_002

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Left corneal thickness
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_EYE_066_001

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/IP00005590a

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

IMPC_EYE_066_001

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

decreased cornea thickness
http://purl.obolibrary.org/obo/MP_0005543

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

330

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

7

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

318

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

5

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

87.3270440251572

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

89.0030303030303

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

88.6

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

89.5714285714286

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

baeb149cb6632d44ebe1a73dd2bde6ab

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withoutWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

1

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.111506326607078

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

-4.34918671558466

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

2.72633522600251

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

0.111201963412685

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: -4.93%, Male: -4.93%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

0.0193723030703511

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

IP00005590a

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.231679055255535

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

0.637778698592747

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

0.0359956553911879

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

87.462230225985

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

0.875694415501893

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

0

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.459204284687905

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - both sexes equally

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information