IMPC RDF data 統計解析結果（定量値）

undimensional_635923
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_635923

undimensional_635923(統計解析結果（定量値）)

URI表示モード

undimensional_635923

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_48818
http://metadb.riken.jp/db/IMPC_RDF/Cohort/48818

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_40785
http://metadb.riken.jp/db/IMPC_RDF/Cohort/40785

project http://purl.org/dc/elements/1.1/contributor

IMPC
http://metadb.riken.jp/db/IMPC_RDF/project/4

organization http://purl.org/dc/elements/1.1/publisher

Helmholtz Zentrum M?nchen Deutsches Forschungszentrum f?r Gesundheit und Umwelt
http://metadb.riken.jp/db/IMPC_RDF/Organization/9

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

German Mouse Clinic
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/HMGU_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Clinical Chemistry
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_CBC_002

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Total protein
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_CBC_006_001

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/H5048-HEPD0671_8_C10-1

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

IMPC_CBC_006_001

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

decreased circulating total protein level
http://purl.obolibrary.org/obo/MP_0005567

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

increased circulating total protein level
http://purl.obolibrary.org/obo/MP_0005568

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

897

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

10

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

859

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

7

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

48.7372526193248

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

49.1429208472687

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

50.5142857142857

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

48.16

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

9fa420a976810c913fc8eb2095abbd84

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

1

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.0141150047084356

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: 2.09%, Male: -3.85%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

0.118710193898877

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

0.146724346488535

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

0.418596830207113

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

0.080934791205695

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

0.0229461580972855

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

0.000432035225517662

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

6.60067505142406e-05

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

H5048-HEPD0671_8_C10-1

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.175779361687314

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

0.349389178165967

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

8.5583765819787e-06

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

46.7545724079114

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

0.58538277619929

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

1

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.00250479693000893

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

1.02358263668513

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

0.812035744113195

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

0.207669788689442

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

0.718389350559206
-1.88620870895763

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

0.718389350559206
-1.88620870895763

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

0.00873282853196919

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - males only

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information