undimensional_642770

http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_642770

undimensional_642770

統計解析結果（定量値）

control cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

• cohort_44388
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/44388

experimental cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

• cohort_41778
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/41778

project

http://purl.org/dc/elements/1.1/contributor

• IMPC
  http://metadb.riken.jp/db/IMPC_RDF/project/4

organization

http://purl.org/dc/elements/1.1/publisher

• Jackson Laboratory
  http://metadb.riken.jp/db/IMPC_RDF/Organization/6

pipeline

http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

• JAX Pipeline
  http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/JAX_001

procedure

http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

• Grip Strength
  http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_GRS_001

parameter

http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

• Forelimb and hindlimb grip strength normalised against body weight
  http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_GRS_011_001

colony

http://metadb.riken.jp/db/IMPC_RDF/measured_colony

• http://metadb.riken.jp/db/IMPC_RDF/Colony/JR30344

dependent_variable

http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

• IMPC_GRS_011_001

control_selection_strategy

http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

• baseline_all

mp_acc

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

male_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

• decreased grip strength
  http://purl.obolibrary.org/obo/MP_0010053

female_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

• increased grip strength
  http://purl.obolibrary.org/obo/MP_0010052

male_controls

http://metadb.riken.jp/db/IMPC_RDF/male_controls

• 1332

male_mutants

http://metadb.riken.jp/db/IMPC_RDF/male_mutants

• 8

female_controls

http://metadb.riken.jp/db/IMPC_RDF/female_controls

• 1331

female_mutants

http://metadb.riken.jp/db/IMPC_RDF/female_mutants

• 8

female_control_mean

http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

• 10.7295732081142

male_control_mean

http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

• 8.97649324324324

female_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

• 10.60087125

male_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

• 7.8035625

metadata_group

http://metadb.riken.jp/db/IMPC_RDF/metadata_group

• 303bab31edbf3049c0948df8849ceeba

stat_method

http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

• Mixed Model framework, linear mixed-effects model, equation withoutWeight
  http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow

http://metadb.riken.jp/db/IMPC_RDF/workflow

• low_batch

weight_available

http://metadb.riken.jp/db/IMPC_RDF/weight_available

status

http://metadb.riken.jp/db/IMPC_RDF/status

• Success

batch_significance

http://metadb.riken.jp/db/IMPC_RDF/batch_significance

• 1

variance_significance

http://metadb.riken.jp/db/IMPC_RDF/variance_significance

• 1

null_test_significance

http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

• 0.101038182051922

genotype_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change

http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

• Female: 8.61%, Male: -2.15%

gender_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

• -1.73810654449863

gender_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

• 0.0534558010431738

gender_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

• 2.10167778891853e-191

weight_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

• +/+

gp1_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

• 0.0214730786425248

gp2_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

• JR30344

gp2_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

• 0.721331369007227

blups_test

http://metadb.riken.jp/db/IMPC_RDF/blups_test

• 0.000419585670379892

rotated_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

• 0.00177104813567814

intercept_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

• 10.6284906692334

intercept_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

• 0.0736509328795611

interaction_significance

http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

• 1

interaction_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

• 0.0463333571872951

gender_female_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

• 0.847870160147469

gender_female_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

• 0.489605951178919

gender_female_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

• 0.0834528666657068

gender_male_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• 0.49213705568283
• -0.211332045353898

gender_male_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• 0.49213705568283
• -0.211332045353898

gender_male_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

• 0.667659636170169

classification_tag

http://metadb.riken.jp/db/IMPC_RDF/classification_tag

• If phenotype is significant - can not classify effect

additional_information

http://metadb.riken.jp/db/IMPC_RDF/additional_information