IMPC RDF data 統計解析結果（定量値）

undimensional_653693
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_653693

undimensional_653693(統計解析結果（定量値）)

URI表示モード

undimensional_653693

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_39069
http://metadb.riken.jp/db/IMPC_RDF/Cohort/39069

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_45255
http://metadb.riken.jp/db/IMPC_RDF/Cohort/45255

project http://purl.org/dc/elements/1.1/contributor

IMPC
http://metadb.riken.jp/db/IMPC_RDF/project/4

organization http://purl.org/dc/elements/1.1/publisher

The Centre for Phenogenomics
http://metadb.riken.jp/db/IMPC_RDF/Organization/27

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

TCP Pipeline
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/TCP_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Light-Dark Test
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_LDT_001

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Side changes
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_LDT_001_001

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/TCPR0758_ADIP

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

IMPC_LDT_001_001

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

abnormal locomotor behavior
http://purl.obolibrary.org/obo/MP_0001392

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

84

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

8

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

111

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

8

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

15.2252252252252

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

12.9166666666667

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

13.875

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

16.875

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

fb194cb45568e4c2578b7fe8bebea150

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withoutWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

1

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.610654598042271

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

1.32185245956345

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

2.63416573956343

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

0.616446197673815

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: 9.23%, Male: 9.23%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

-1.90247769973191

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

1.22286653312321

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

0.121615782541962

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

0.000270812798138881

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

TCPR0758_ADIP

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.0624921432185392

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

0.172033225277187

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

4.66731592104681e-05

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

14.7684816431976

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

0.966205651703077

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

0

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.789343966698856

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - both sexes equally

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information