IMPC RDF data 統計解析結果（定量値）

undimensional_657950
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_657950

undimensional_657950(統計解析結果（定量値）)

URI表示モード

undimensional_657950

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_37887
http://metadb.riken.jp/db/IMPC_RDF/Cohort/37887

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_38063
http://metadb.riken.jp/db/IMPC_RDF/Cohort/38063

project http://purl.org/dc/elements/1.1/contributor

EUMODIC
http://metadb.riken.jp/db/IMPC_RDF/project/1

organization http://purl.org/dc/elements/1.1/publisher

Medical Research Council centre for mouse genetics
http://metadb.riken.jp/db/IMPC_RDF/Organization/7

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

EUMODIC Pipeline 1
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/ESLIM_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

DEXA
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/ESLIM_005_001

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Fat/Body weight
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/ESLIM_005_001_703

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/EPD0052_1_G06

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

ESLIM_005_001_703

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

119

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

11

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

84

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

12

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

0.189203392857143

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

0.239505084033613

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

0.209439416666667

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

0.258082909090909

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

733e047f4e0ac9a534c05fe3a1b4eda6

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withoutWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

1

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.165743055236083

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

0.0235571410820823

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

0.0172770252254649

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

0.180545958277427

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: 10.7%, Male: 10.7%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

0.0473997632715883

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

0.00928545827327695

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

8.22144456124645e-07

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

0.723348109848005

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

EPD0052_1_G06

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.221135499258507

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

0.929875768353641

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

0.105635863239593

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

0.19171380831569

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

0.0081764196404882

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

0

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.152955651499914

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - both sexes equally

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information