undimensional_663360

http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_663360

undimensional_663360

統計解析結果（定量値）

control cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

• cohort_44388
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/44388

experimental cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

• cohort_44769
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/44769

project

http://purl.org/dc/elements/1.1/contributor

• IMPC
  http://metadb.riken.jp/db/IMPC_RDF/project/4

organization

http://purl.org/dc/elements/1.1/publisher

• Jackson Laboratory
  http://metadb.riken.jp/db/IMPC_RDF/Organization/6

pipeline

http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

• JAX Pipeline
  http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/JAX_001

procedure

http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

• Sleep Wake
  http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/JAX_SLW_001

parameter

http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

• Dark sleep bout lengths mean
  http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/JAX_SLW_009_001

colony

http://metadb.riken.jp/db/IMPC_RDF/measured_colony

• http://metadb.riken.jp/db/IMPC_RDF/Colony/JR25389

dependent_variable

http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

• JAX_SLW_009_001

control_selection_strategy

http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

• baseline_all

mp_acc

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

• abnormal sleep behavior
  http://purl.obolibrary.org/obo/MP_0011396

male_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

• abnormal sleep behavior
  http://purl.obolibrary.org/obo/MP_0011396

female_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

• abnormal sleep behavior
  http://purl.obolibrary.org/obo/MP_0011396

male_controls

http://metadb.riken.jp/db/IMPC_RDF/male_controls

• 902

male_mutants

http://metadb.riken.jp/db/IMPC_RDF/male_mutants

• 5

female_controls

http://metadb.riken.jp/db/IMPC_RDF/female_controls

• 930

female_mutants

http://metadb.riken.jp/db/IMPC_RDF/female_mutants

• 4

female_control_mean

http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

• 195.91288172043

male_control_mean

http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

• 273.944678492239

female_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

• 191.14

male_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

• 245.58

metadata_group

http://metadb.riken.jp/db/IMPC_RDF/metadata_group

• f57b373aa5ea2f8eddc7d3df11540538

stat_method

http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

• Mixed Model framework, linear mixed-effects model, equation withWeight
  http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withWeight

workflow

http://metadb.riken.jp/db/IMPC_RDF/workflow

• low_batch

weight_available

http://metadb.riken.jp/db/IMPC_RDF/weight_available

status

http://metadb.riken.jp/db/IMPC_RDF/status

• Success

batch_significance

http://metadb.riken.jp/db/IMPC_RDF/batch_significance

• 1

variance_significance

http://metadb.riken.jp/db/IMPC_RDF/variance_significance

• 0

null_test_significance

http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

• 0.00480697781120015

genotype_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change

http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

• Female: -6.69%, Male: -18.7%

gender_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

• 49.4253335995567

gender_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

• 4.46876227342393

gender_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

• 2.02008430654746e-27

weight_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

• 5.77888507259455

weight_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

• 0.697656759328787

weight_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

• 2.56250975416562e-16

gp1_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

• +/+

gp1_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

• 7.37e-10

gp2_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

• JR25389

gp2_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

• 0.359809036226044

blups_test

http://metadb.riken.jp/db/IMPC_RDF/blups_test

• 0.820825102933168

rotated_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

• 7.37e-10

intercept_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

• 76.8639705567221

intercept_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

• 14.6419951692258

interaction_significance

http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

• 1

interaction_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

• 0.0452233194666727

gender_female_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

• -15.6743922793895

gender_female_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

• 14.2433921258901

gender_female_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

• 0.271299510768695

gender_male_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• 12.0942617165017
• -43.8087567908829

gender_male_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• 12.0942617165017
• -43.8087567908829

gender_male_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

• 0.000301448156069108

classification_tag

http://metadb.riken.jp/db/IMPC_RDF/classification_tag

• If phenotype is significant - males only

additional_information

http://metadb.riken.jp/db/IMPC_RDF/additional_information