undimensional_668374

http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_668374

undimensional_668374

統計解析結果（定量値）

control cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

• cohort_48818
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/48818

experimental cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

• cohort_37978
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/37978

project

http://purl.org/dc/elements/1.1/contributor

• EUMODIC
  http://metadb.riken.jp/db/IMPC_RDF/project/1

organization

http://purl.org/dc/elements/1.1/publisher

• Institut Clinique de la Souris
  http://metadb.riken.jp/db/IMPC_RDF/Organization/8

pipeline

http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

• EUMODIC Pipeline 1
  http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/ESLIM_001

procedure

http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

• Body Weight
  http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/ESLIM_022_001

parameter

http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

• Simplified IPGTT Body Weight
  http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/ESLIM_022_001_706

colony

http://metadb.riken.jp/db/IMPC_RDF/measured_colony

• http://metadb.riken.jp/db/IMPC_RDF/Colony/EPD0039_3_C02

dependent_variable

http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

• ESLIM_022_001_706

control_selection_strategy

http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

• baseline_all

mp_acc

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

male_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

• increased body weight
  http://purl.obolibrary.org/obo/MP_0001260

female_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

• decreased body weight
  http://purl.obolibrary.org/obo/MP_0001262

male_controls

http://metadb.riken.jp/db/IMPC_RDF/male_controls

• 95

male_mutants

http://metadb.riken.jp/db/IMPC_RDF/male_mutants

• 9

female_controls

http://metadb.riken.jp/db/IMPC_RDF/female_controls

• 93

female_mutants

http://metadb.riken.jp/db/IMPC_RDF/female_mutants

• 9

female_control_mean

http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

• 18.3977096774194

male_control_mean

http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

• 22.3157894736842

female_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

• 18.5222222222222

male_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

• 23.3444444444444

metadata_group

http://metadb.riken.jp/db/IMPC_RDF/metadata_group

• f54e4b251134577090c28f6e74ebaf62

stat_method

http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

• Mixed Model framework, linear mixed-effects model, equation withoutWeight
  http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow

http://metadb.riken.jp/db/IMPC_RDF/workflow

• low_batch

weight_available

http://metadb.riken.jp/db/IMPC_RDF/weight_available

status

http://metadb.riken.jp/db/IMPC_RDF/status

• Success

batch_significance

http://metadb.riken.jp/db/IMPC_RDF/batch_significance

• 1

variance_significance

http://metadb.riken.jp/db/IMPC_RDF/variance_significance

• 1

null_test_significance

http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

• 0.101061315233374

genotype_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change

http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

• Female: -5.95%, Male: 3.37%

gender_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

• 3.97743925735741

gender_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

• 0.233535855086919

gender_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

• 8.20718634665448e-40

weight_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

• +/+

gp1_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

• 0.0304973962069939

gp2_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

• EPD0039_3_C02

gp2_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

• 0.776717607997881

blups_test

http://metadb.riken.jp/db/IMPC_RDF/blups_test

• 0.807279279791345

rotated_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

• 0.016108695851465

intercept_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

• 18.551533380333

intercept_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

• 0.292658055297803

interaction_significance

http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

• 1

interaction_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

• 0.0269858139621468

gender_female_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

• -1.21537442807624

gender_female_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

• 0.946129020949442

gender_female_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

• 0.200538113094995

gender_male_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• 0.688276734608338
• 0.783881874650492

gender_male_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• 0.688276734608338
• 0.783881874650492

gender_male_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

• 0.381056803633086

classification_tag

http://metadb.riken.jp/db/IMPC_RDF/classification_tag

• If phenotype is significant - can not classify effect

additional_information

http://metadb.riken.jp/db/IMPC_RDF/additional_information