undimensional_67460

http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_67460

undimensional_67460

統計解析結果（定量値）

control cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

• cohort_38010
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/38010

experimental cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

• cohort_38246
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/38246

project

http://purl.org/dc/elements/1.1/contributor

• EUMODIC
  http://metadb.riken.jp/db/IMPC_RDF/project/1

organization

http://purl.org/dc/elements/1.1/publisher

• Wellcome Trust Sanger Institute
  http://metadb.riken.jp/db/IMPC_RDF/Organization/3

pipeline

http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

• EUMODIC Pipeline 1
  http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/ESLIM_001

procedure

http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

• Body Weight
  http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/ESLIM_022_001

parameter

http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

• Rotarod Body Weight
  http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/ESLIM_022_001_710

colony

http://metadb.riken.jp/db/IMPC_RDF/measured_colony

• http://metadb.riken.jp/db/IMPC_RDF/Colony/EPD0070_2_G09

dependent_variable

http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

• ESLIM_022_001_710

control_selection_strategy

http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

• baseline_all

mp_acc

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

male_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

• increased body weight
  http://purl.obolibrary.org/obo/MP_0001260

female_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

• decreased body weight
  http://purl.obolibrary.org/obo/MP_0001262

male_controls

http://metadb.riken.jp/db/IMPC_RDF/male_controls

• 45

male_mutants

http://metadb.riken.jp/db/IMPC_RDF/male_mutants

• 8

female_controls

http://metadb.riken.jp/db/IMPC_RDF/female_controls

• 38

female_mutants

http://metadb.riken.jp/db/IMPC_RDF/female_mutants

• 8

female_control_mean

http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

• 24.2394736842105

male_control_mean

http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

• 28.3311111111111

female_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

• 23.0875

male_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

• 29.6625

metadata_group

http://metadb.riken.jp/db/IMPC_RDF/metadata_group

• 00fd8d0f0b3a6666da01fe3e24c980d0

stat_method

http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

• Mixed Model framework, linear mixed-effects model, equation withoutWeight
  http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow

http://metadb.riken.jp/db/IMPC_RDF/workflow

• low_batch

weight_available

http://metadb.riken.jp/db/IMPC_RDF/weight_available

status

http://metadb.riken.jp/db/IMPC_RDF/status

• Success

batch_significance

http://metadb.riken.jp/db/IMPC_RDF/batch_significance

• 1

variance_significance

http://metadb.riken.jp/db/IMPC_RDF/variance_significance

• 1

null_test_significance

http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

• 0.117580768834867

genotype_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change

http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

• Female: -5.35%, Male: 3.01%

gender_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

• 4.39641857944757

gender_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

• 0.467780066601288

gender_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

• 1.04181985626283e-14

weight_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

• +/+

gp1_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

• 0.464156250600773

gp2_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

• EPD0070_2_G09

gp2_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

• 0.47075733479986

blups_test

http://metadb.riken.jp/db/IMPC_RDF/blups_test

• 0.0210043733874009

rotated_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

• 0.833910903447278

intercept_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

• 23.9842136783588

intercept_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

• 0.4310114947155

interaction_significance

http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

• 1

interaction_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

• 0.0485820630664018

gender_female_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

• -1.41564251004631

gender_female_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

• 0.84866643393763

gender_female_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

• 0.0990687171880464

gender_male_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• 0.795303980160865
• 0.829681708442516

gender_male_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

• 0.795303980160865
• 0.829681708442516

gender_male_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

• 0.340561817216586

classification_tag

http://metadb.riken.jp/db/IMPC_RDF/classification_tag

• If phenotype is significant - can not classify effect

additional_information

http://metadb.riken.jp/db/IMPC_RDF/additional_information