undimensional_72563

http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_72563

undimensional_72563

統計解析結果（定量値）

control cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

• cohort_39069
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/39069

experimental cohort

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

• cohort_46507
  http://metadb.riken.jp/db/IMPC_RDF/Cohort/46507

project

http://purl.org/dc/elements/1.1/contributor

• IMPC
  http://metadb.riken.jp/db/IMPC_RDF/project/4

organization

http://purl.org/dc/elements/1.1/publisher

• The Centre for Phenogenomics
  http://metadb.riken.jp/db/IMPC_RDF/Organization/27

pipeline

http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

• TCP Pipeline
  http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/TCP_001

procedure

http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

• Hematology
  http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_HEM_002

parameter

http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

• Neutrophil differential count
  http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_HEM_029_001

colony

http://metadb.riken.jp/db/IMPC_RDF/measured_colony

• http://metadb.riken.jp/db/IMPC_RDF/Colony/TCPM0717Cre

dependent_variable

http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

• IMPC_HEM_029_001

control_selection_strategy

http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

• baseline_all

mp_acc

http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

• increased neutrophil cell number
  http://purl.obolibrary.org/obo/MP_0000219

male_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

female_mp_acc

http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

male_controls

http://metadb.riken.jp/db/IMPC_RDF/male_controls

• 213

male_mutants

http://metadb.riken.jp/db/IMPC_RDF/male_mutants

• 7

female_controls

http://metadb.riken.jp/db/IMPC_RDF/female_controls

• 222

female_mutants

http://metadb.riken.jp/db/IMPC_RDF/female_mutants

• 4

female_control_mean

http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

• 14.9162612612613

male_control_mean

http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

• 18.5488262910798

female_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

• 16.0375

male_experimental_mean

http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

• 31.6457142857143

metadata_group

http://metadb.riken.jp/db/IMPC_RDF/metadata_group

• f361d6ad766e5c4e2f9961abf9da309f

stat_method

http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

• Mixed Model framework, linear mixed-effects model, equation withoutWeight
  http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow

http://metadb.riken.jp/db/IMPC_RDF/workflow

• low_batch

weight_available

http://metadb.riken.jp/db/IMPC_RDF/weight_available

status

http://metadb.riken.jp/db/IMPC_RDF/status

• Success

batch_significance

http://metadb.riken.jp/db/IMPC_RDF/batch_significance

• 1

variance_significance

http://metadb.riken.jp/db/IMPC_RDF/variance_significance

• 0

null_test_significance

http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

• 0.11135627234979

genotype_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

• 8.8069247316288

genotype_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

• 5.45609111948276

genotype_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

• 0.107407437261416

genotype_percentage_change

http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

• Female: 52.04%, Male: 52.04%

gender_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

• 3.29991731461138

gender_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

• 0.526253558039089

gender_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

• 1.07230576773169e-09

weight_parameter_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

• +/+

gp1_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

• 7.37e-10

gp2_genotype

http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

• TCPM0717Cre

gp2_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

• 1.23514660021688e-05

blups_test

http://metadb.riken.jp/db/IMPC_RDF/blups_test

• 2.40309933882173e-09

rotated_residuals_normality_test

http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

• 7.37e-10

intercept_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

• 15.0189605358563

intercept_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

• 0.490474457954873

interaction_significance

http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

• 0

interaction_effect_pvalue

http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

• 0.279370006629274

gender_female_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

gender_female_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

gender_female_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

gender_male_ko_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_stderr_estimate

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_pvalue

http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

classification_tag

http://metadb.riken.jp/db/IMPC_RDF/classification_tag

• If phenotype is significant - both sexes equally

additional_information

http://metadb.riken.jp/db/IMPC_RDF/additional_information