IMPC RDF data 統計解析結果（定量値）

undimensional_87600
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_87600

undimensional_87600(統計解析結果（定量値）)

URI表示モード

undimensional_87600

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_39069
http://metadb.riken.jp/db/IMPC_RDF/Cohort/39069

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_45640
http://metadb.riken.jp/db/IMPC_RDF/Cohort/45640

project http://purl.org/dc/elements/1.1/contributor

IMPC
http://metadb.riken.jp/db/IMPC_RDF/project/4

organization http://purl.org/dc/elements/1.1/publisher

University of California at Davis School of Veterinary Medicine
http://metadb.riken.jp/db/IMPC_RDF/Organization/2

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

UCD Pipeline
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/UCD_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Acoustic Startle and Pre-pulse Inhibition (PPI)
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_ACS_003

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

% Pre-pulse inhibition - PPI2
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_ACS_034_001

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/ET7865

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

IMPC_ACS_034_001

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

increased prepulse inhibition
http://purl.obolibrary.org/obo/MP_0009141

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

745

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

8

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

752

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

8

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

56.1273969242021

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

54.5127893825503

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

62.7199625

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

61.938

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

53637dd87ee81b84d1d3d9589e7c0b9b

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withoutWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

1

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.190015698560076

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

6.20574754914458

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

4.74073136581831

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

0.190793315201806

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: 11.2%, Male: 11.2%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

0.000205149388879765

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

ET7865

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.622281926712433

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

0.458946329971406

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

0.000265229711040089

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

55.462162195953

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

0.475160666906167

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

0

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.850462310410327

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - both sexes equally

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information