IMPC RDF data 統計解析結果（定量値）

undimensional_99144
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_99144

undimensional_99144(統計解析結果（定量値）)

URI表示モード

undimensional_99144

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_37895
http://metadb.riken.jp/db/IMPC_RDF/Cohort/37895

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_38141
http://metadb.riken.jp/db/IMPC_RDF/Cohort/38141

project http://purl.org/dc/elements/1.1/contributor

EUMODIC
http://metadb.riken.jp/db/IMPC_RDF/project/1

organization http://purl.org/dc/elements/1.1/publisher

Medical Research Council centre for mouse genetics
http://metadb.riken.jp/db/IMPC_RDF/Organization/7

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

EUMODIC Pipeline 1
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/ESLIM_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Body Weight
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/ESLIM_022_001

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

Dexa Body Weight
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/ESLIM_022_001_707

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/March%207%20KO%20(Cross%202)

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

ESLIM_022_001_707

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

decreased body weight
http://purl.obolibrary.org/obo/MP_0001262

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

138

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

11

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

158

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

8

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

23.2304430379747

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

30.4558695652174

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

23.1975

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

27.9727272727273

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

733e047f4e0ac9a534c05fe3a1b4eda6

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, linear mixed-effects model, equation withoutWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_linear_mixed-effects_model_equation_withoutWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

1

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

0

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.0329539946714155

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

-1.42694855314735

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

0.655225196355699

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

0.0302964305046614

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: -5.37%, Male: -5.37%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

7.08812677739638

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

0.225199739803015

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

7.70821187294164e-92

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

0.017101990536791

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

March 7 KO (Cross 2)

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

0.633054517137029

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

0.901848999267407

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

0.0564145535975993

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

23.4415205944291

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

0.196269121461753

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

0

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.064517765759309

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - both sexes equally

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information