IMPC RDF data 統計解析結果（定量値）

undimensional_109255
http://metadb.riken.jp/db/IMPC_RDF/Stats_undimensional_result/undimensional_109255

undimensional_109255(統計解析結果（定量値）)

URI表示モード

undimensional_109255

統計解析結果（定量値）

control cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity_Control

cohort_39069
http://metadb.riken.jp/db/IMPC_RDF/Cohort/39069

experimental cohort http://metadb.riken.jp/db/bioresource_schema/brs_indicatesWholeEntity

cohort_44894
http://metadb.riken.jp/db/IMPC_RDF/Cohort/44894

project http://purl.org/dc/elements/1.1/contributor

IMPC
http://metadb.riken.jp/db/IMPC_RDF/project/4

organization http://purl.org/dc/elements/1.1/publisher

The Centre for Phenogenomics
http://metadb.riken.jp/db/IMPC_RDF/Organization/27

pipeline http://metadb.riken.jp/db/bioresource_schema/brs_detectionPipeline

TCP Pipeline
http://metadb.riken.jp/db/IMPC_RDF/Impress_pipeline/TCP_001

procedure http://metadb.riken.jp/db/bioresource_schema/brs_detectionProcedure

Auditory Brain Stem Response
http://metadb.riken.jp/db/IMPC_RDF/Impress_procedure/IMPC_ABR_002

parameter http://metadb.riken.jp/db/bioresource_schema/brs_detectionParameter

30kHz-evoked ABR Threshold
http://metadb.riken.jp/db/IMPC_RDF/Impress_parameter/IMPC_ABR_012_001

colony http://metadb.riken.jp/db/IMPC_RDF/measured_colony

http://metadb.riken.jp/db/IMPC_RDF/Colony/BL3733

dependent_variable http://metadb.riken.jp/db/IMPC_RDF/dependent_variable

IMPC_ABR_012_001

control_selection_strategy http://metadb.riken.jp/db/IMPC_RDF/control_selection_strategy

baseline_all

mp_acc http://metadb.riken.jp/db/bioresource_schema/brs_indicatesPhenotype

male_mp_acc http://metadb.riken.jp/db/IMPC_RDF/male_mp_acc

decreased threshold for auditory brainstem response
http://purl.obolibrary.org/obo/MP_0011968

female_mp_acc http://metadb.riken.jp/db/IMPC_RDF/female_mp_acc

increased or absent threshold for auditory brainstem response
http://purl.obolibrary.org/obo/MP_0011967

male_controls http://metadb.riken.jp/db/IMPC_RDF/male_controls

47

male_mutants http://metadb.riken.jp/db/IMPC_RDF/male_mutants

2

female_controls http://metadb.riken.jp/db/IMPC_RDF/female_controls

48

female_mutants http://metadb.riken.jp/db/IMPC_RDF/female_mutants

2

female_control_mean http://metadb.riken.jp/db/IMPC_RDF/female_control_mean

42.1875

male_control_mean http://metadb.riken.jp/db/IMPC_RDF/male_control_mean

39.0425531914894

female_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/female_experimental_mean

62.5

male_experimental_mean http://metadb.riken.jp/db/IMPC_RDF/male_experimental_mean

32.5

metadata_group http://metadb.riken.jp/db/IMPC_RDF/metadata_group

ecf1cecda7346092b8087c4b58d7ceea

stat_method http://metadb.riken.jp/db/bioresource_schema/brs_methodForStatistics

Mixed Model framework, generalized least squares, equation withoutWeight
http://metadb.riken.jp/db/IMPC_RDF/Stasistical_procedure/Mixed_Model_framework_generalized_least_squares_equation_withoutWeight

workflow http://metadb.riken.jp/db/IMPC_RDF/workflow

low_batch

weight_available http://metadb.riken.jp/db/IMPC_RDF/weight_available

status http://metadb.riken.jp/db/IMPC_RDF/status

Success

batch_significance http://metadb.riken.jp/db/IMPC_RDF/batch_significance

0

variance_significance http://metadb.riken.jp/db/IMPC_RDF/variance_significance

1

null_test_significance http://metadb.riken.jp/db/IMPC_RDF/null_test_significance

0.0038415768127268

genotype_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_parameter_estimate

genotype_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/genotype_stderr_estimate

genotype_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/genotype_effect_pvalue

genotype_percentage_change http://metadb.riken.jp/db/IMPC_RDF/genotype_percentage_change

Female: 49.65%, Male: -15.99%

gender_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_parameter_estimate

-3.14494680851064

gender_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_stderr_estimate

1.80526065798542

gender_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_effect_pvalue

0.0847271683908609

weight_parameter_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_parameter_estimate

weight_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/weight_stderr_estimate

weight_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/weight_effect_pvalue

gp1_genotype http://metadb.riken.jp/db/IMPC_RDF/gp1_genotype

+/+

gp1_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp1_residuals_normality_test

0.0712442653212961

gp2_genotype http://metadb.riken.jp/db/IMPC_RDF/gp2_genotype

BL3733

gp2_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/gp2_residuals_normality_test

blups_test http://metadb.riken.jp/db/IMPC_RDF/blups_test

rotated_residuals_normality_test http://metadb.riken.jp/db/IMPC_RDF/rotated_residuals_normality_test

intercept_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_estimate

42.1875

intercept_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/intercept_stderr_estimate

1.26977579468805

interaction_significance http://metadb.riken.jp/db/IMPC_RDF/interaction_significance

1

interaction_effect_pvalue http://metadb.riken.jp/db/IMPC_RDF/interaction_effect_pvalue

0.00363015406768849

gender_female_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_estimate

20.3125

gender_female_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_stderr_estimate

6.34887897344024

gender_female_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_female_ko_pvalue

0.00187232970091129

gender_male_ko_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

6.35158004949243
-6.54255319148937

gender_male_ko_stderr_estimate http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_estimate

6.35158004949243
-6.54255319148937

gender_male_ko_pvalue http://metadb.riken.jp/db/IMPC_RDF/gender_male_ko_pvalue

0.305593943311173

classification_tag http://metadb.riken.jp/db/IMPC_RDF/classification_tag

If phenotype is significant - females only

additional_information http://metadb.riken.jp/db/IMPC_RDF/additional_information