AT1G54490

http://metadb.riken.jp/db/SciNetS_rib102i/crib102u0rib102u10000054490i

AT1G54490

TAIR10 Locus

Swiss-Prot Plants

http://metadb.riken.jp/db/SciNetS_ria214i/pria214u4i

• XRN4_ARATH
  http://metadb.riken.jp/db/SciNetS_ria214i/cria214s6ria214u2691526004i

synonym

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u14i

species

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u18i

gene type

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u17i

locus region

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u3i

seeAlso

http://www.w3.org/2000/01/rdf-schema#seeAlso

description

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u13i

attributionURL

http://creativecommons.org/ns#attributionURL

RAFL cDNA

http://metadb.riken.jp/db/SciNetS_ria11i/pria11s1i

• RAFL08-14-F05
  http://metadb.riken.jp/db/SciNetS_ria11i/cria11s1ria11u6050i

表現型－遺伝子

http://metadb.riken.jp/db/SciNetS_ria224i/pria224u8i

• elongated root for AT1G54490
  http://metadb.riken.jp/db/SciNetS_ria224i/cria224u3ria224u855i
• serrated vascular leaf for AT1G54490
  http://metadb.riken.jp/db/SciNetS_ria224i/cria224u3ria224u1633i
• elongated hypocotyl for AT1G54490
  http://metadb.riken.jp/db/SciNetS_ria224i/cria224u3ria224u850i
• insensitive toward in organ named hypocotyl under influence of ethene for AT1G54490
  http://metadb.riken.jp/db/SciNetS_ria224i/cria224u3ria224u1492i
• insensitive toward in organ named root under influence of ethene for AT1G54490
  http://metadb.riken.jp/db/SciNetS_ria224i/cria224u3ria224u1494i

TAIR_gene_model (on ARTADE2DB) (ver. TAIR9)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• AT1G54490.1
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u125449001000i

TAIR によるGO注釈

http://metadb.riken.jp/db/SciNetS_ria269i/pria269u1i

• AT1G54490:involved in:nuclear-transcribed mRNA catabolic process, exonucleolytic
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29392i
• AT1G54490:involved in:miRNA catabolic process
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29390i
• AT1G54490:involved in:nuclear-transcribed mRNA catabolic process
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29401i
• AT1G54490:involved in:nucleobase-containing compound metabolic process
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29393i
• AT1G54490:involved in:production of miRNAs involved in gene silencing by miRNA
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29388i
• AT1G54490:has:exonuclease activity
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29402i
• AT1G54490:involved in:developmental growth
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29366i
• AT1G54490:involved in:ethylene mediated signaling pathway
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29377i
• AT1G54490:involved in:regulation of chromosome organization
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29399i
• AT1G54490:involved in:reciprocal meiotic recombination
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29394i
• AT1G54490:involved in:post-translational protein modification
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29364i
• AT1G54490:functions in:nucleic acid binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29370i
• AT1G54490:involved in:reproduction
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29359i
• AT1G54490:located in:nucleus
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29373i
• AT1G54490:involved in:cell growth
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29395i
• AT1G54490:involved in:cell adhesion
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29368i
• AT1G54490:has:5'-3' exoribonuclease activity
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29382i
• AT1G54490:located in:cytosol
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29374i
• AT1G54490:involved in:positive regulation of transcription, DNA-dependent
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29360i
• AT1G54490:involved in:xylan biosynthetic process
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29371i
• AT1G54490:involved in:actin nucleation
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29361i
• AT1G54490:involved in:positive regulation of organelle organization
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29396i
• AT1G54490:involved in:protein glycosylation
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29372i
• AT1G54490:has:5'-3' exonuclease activity
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29383i
• AT1G54490:has:nucleic acid binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29386i
• AT1G54490:involved in:cell-cell signaling
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29378i
• AT1G54490:involved in:deadenylation-independent decapping of nuclear-transcribed mRNA
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29397i
• AT1G54490:involved in:chromatin organization
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29380i
• AT1G54490:involved in:production of ta-siRNAs involved in RNA interference
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29365i
• AT1G54490:involved in:virus induced gene silencing
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29376i
• AT1G54490:located in:intracellular
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29387i
• AT1G54490:involved in:regulation of gene expression, epigenetic
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29398i
• AT1G54490:involved in:positive regulation of cell proliferation
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29400i
• AT1G54490:involved in:DNA methylation
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29381i
• AT1G54490:involved in:response to 1-aminocyclopropane-1-carboxylic acid
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29369i
• AT1G54490:involved in:glucuronoxylan metabolic process
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29403i
• AT1G54490:involved in:protein N-linked glycosylation
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29358i
• AT1G54490:involved in:trichome morphogenesis
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29375i
• AT1G54490:involved in:regulation of cell differentiation
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29379i
• AT1G54490:involved in:response to ethylene stimulus
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29384i
• AT1G54490:involved in:chromatin silencing
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29362i
• AT1G54490:involved in:gravitropism
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29363i
• AT1G54490:has:zinc ion binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29385i
• AT1G54490:involved in:unidimensional cell growth
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29391i
• AT1G54490:involved in:regulation of transcription, DNA-dependent
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29367i
• AT1G54490:involved in:meristem initiation
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u29389i

TAIRによるPO注釈（生育ステージ）

http://metadb.riken.jp/db/SciNetS_ria270i/pria270u1i

• AT1G54490:expressed during:LP.04 four leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u119639i
• AT1G54490:expressed during:LP.10 ten leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u106838i
• AT1G54490:expressed during:LP.02 two leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u94486i
• AT1G54490:expressed during:D bilateral stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u56678i
• AT1G54490:expressed during:F mature embryo stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u29596i
• AT1G54490:expressed during:LP.06 six leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u133118i
• AT1G54490:expressed during:petal differentiation and expansion stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u146313i
• AT1G54490:expressed during:LP.12 twelve leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u70163i
• AT1G54490:expressed during:C globular stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u42935i
• AT1G54490:expressed during:LP.08 eight leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u82315i
• AT1G54490:expressed during:4 leaf senescence stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u2772i
• AT1G54490:expressed during:4 anthesis
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u162775i
• AT1G54490:expressed during:E expanded cotyledon stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u15806i

TAIRによるPO注釈（器官名）

http://metadb.riken.jp/db/SciNetS_ria273i/pria273u1i

• AT1G54490:expressed in:seed
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u101006i
• AT1G54490:expressed in:petiole
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u242170i
• AT1G54490:expressed in:pedicel
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u216628i
• AT1G54490:expressed in:stem
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u88i
• AT1G54490:expressed in:vascular leaf
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u82i
• AT1G54490:expressed in:flower
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u85i
• AT1G54490:expressed in:root
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u79i
• AT1G54490:expressed in:shoot system
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u73321i
• AT1G54490:expressed in:embryo
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u86363i
• AT1G54490:expressed in:sepal
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u157007i
• AT1G54490:expressed in:stamen
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u128917i
• AT1G54490:expressed in:cauline leaf
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u6219i
• AT1G54490:expressed in:petal
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u172293i
• AT1G54490:expressed in:hypocotyl
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u254852i
• AT1G54490:expressed in:leaf apex
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u268793i
• AT1G54490:expressed in:collective leaf structure
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u282133i
• AT1G54490:expressed in:shoot apex
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u19310i
• AT1G54490:expressed in:leaf lamina base
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u46321i
• AT1G54490:expressed in:cotyledon
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u229970i
• AT1G54490:expressed in:carpel
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u142836i
• AT1G54490:expressed in:inflorescence meristem
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u33412i

A.thaliana cDNA

http://metadb.riken.jp/db/SciNetS_ria277i/pria277u2i

• NM_104327
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u29597i
• RAFL08-14-F05
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u51800i
• AY091411
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u7995i
• AF286718
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u1165i

AT_TAIR_gene

http://metadb.riken.jp/db/SciNetS_rib101i/prib101s4i

• AT1G54490.1
  http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u10000544901i

TAIR10 Gene Model

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u2i

• AT1G54490.1
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u10000544901i

RIKEN A.thaliana gene family

http://metadb.riken.jp/db/SciNetS_rib123i/prib123s1i

• Cluster1103
  http://metadb.riken.jp/db/SciNetS_rib123i/crib123s1rib123u1103i

Domain Annotation(A.thaliana)

http://metadb.riken.jp/db/SciNetS_rib126i/prib126u1i

• XRN_N
  http://metadb.riken.jp/db/SciNetS_rib126i/crib126u1rib126u221i

RIKEN Ortholog(A.thaliana and Rice)

http://metadb.riken.jp/db/SciNetS_rib127i/prib127u1i

• At-Os_Ortholog9021
  http://metadb.riken.jp/db/SciNetS_rib127i/crib127u1rib127u9021i