OMAT1P112670http://metadb.riken.jp/db/SciNetS_ria227i/cria227s1ria227u101126700000i
Other supporting information
| Gene Model | |
 | |
| Correlation Plot | |
 | |
Expression profile (Values are plotted in Log(2) values.)
Genes with related expresssion profiles.
| Positively Correlated Genes | ||||||
|---|---|---|---|---|---|---|
| Gens | PCC | Definition | Overlap gene | Definition | Overlap gene(antisense) | Definition |
| OMAT1P000510 | 0.998204 | - | AT1G02190 | CER1 protein, putative | - | - |
| OMAT5P108490 | 0.996986 | - | AT5G33370 | GDSL-motif lipase/hydrolase family protein | - | - |
| OMAT1P000920 | 0.994351 | - | AT1G03170 | unknown protein | - | - |
| OMAT4P105130 | 0.993698 | - | AT4G20050 | QRT3 (QUARTET 3) | - | - |
| OMAT2P108230 | 0.992951 | - | AT2G36190 | AtcwINV4 (Arabidopsis thaliana cell wall invertase 4) | - | - |
| OMAT1P100550 | 0.992938 | - | AT1G02800 | ATCEL2 | - | - |
| OMAT4P013730 | 0.991842 | - | AT4G39480 | CYP96A9 (CYTOCHROME P450 96 A9) | - | - |
| OMAT3P016710 | 0.991417 | - | AT3G59530 | strictosidine synthase family protein | - | - |
| OMAT1P110800 | 0.991211 | - | AT1G35310 | MLP168 (MLP-LIKE PROTEIN 168) | - | - |
| OMAT3P104860 | 0.990343 | - | AT3G14380 | integral membrane family protein | - | - |
| Negatively Correlated Genes | ||||||
| Gens | PCC | Definition | Overlap gene | Definition | Overlap gene(antisense) | Definition |
| OMAT3P004170 | -0.588085 | - | AT3G11900 | ANT1 (AROMATIC AND NEUTRAL TRANSPORTER 1) | - | - |
| OMAT3P002120 | -0.550004 | - | AT3G06125 | other RNA | - | - |
| OMAT1P023480 | -0.548909 | - | AT1G78870 | UBC35 (UBIQUITIN-CONJUGATING ENZYME 35) | - | - |
| OMAT3P008640 | -0.536302 | - | AT3G22890 | APS1 (ATP SULFURYLASE 1) | - | - |
| OMAT1P002175 | -0.520297 | - | AT1G06650 | 2-oxoglutarate-dependent dioxygenase, putative | - | - |
| OMAT2P101680 | -0.509153 | - | AT2G14910 | unknown protein | - | - |
| OMAT3P010710 | -0.500945 | - | AT3G28715 | H+-transporting two-sector ATPase, putative | - | - |
| OMAT3P002350 | -0.496765 | - | AT3G66654 | peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein | - | - |
| OMAT3P110940 | -0.490212 | - | AT3G48000 | ALDH2B4 (ALDEHYDE DEHYDROGENASE 2B4) | - | - |
| OMAT3P113500 | -0.486641 | - | AT3G55560 | AGF2 (AT-hook protein of GA feedback 2) | - | - |
Get whole results
Over-Representation Analysis Result
| p-value | <= 1.57e-23 | :20 terms with high significance | |
| 1.57e-23 < | p-value | <= 8.76e-06 | :With considering multiple testing correction; p <= 1.00e-02 / 1142 |
| 8.76e-06 < | p-value | <= 1.00e-02 |
| Type of term (*1) | Depth of the term in ontology tree | ID/Term | Description | Number of genes | Over-Representative rate (*2) | p-value (*3) | PosMed p-value (*4) (Link to PosMed) | Found on gene annotation |
|---|---|---|---|---|---|---|---|---|
| B | 4 | GO:0006629 | lipid metabolic process | 20/201 | 4.58 | 3.61e-09 | - | no |
| B | 4 | GO:0005975 | carbohydrate metabolic process | 17/201 | 3.25 | 6.05e-06 | - | no |
| B | 3 | GO:0048869 | cellular developmental process | 11/201 | 3.94 | 2.74e-05 | - | no |
| B | 4 | GO:0044255 | cellular lipid metabolic process | 10/201 | 3.70 | 9.58e-05 | - | no |
| B | 3 | GO:0009653 | anatomical structure morphogenesis | 10/201 | 2.96 | 6.41e-04 | - | no |
| B | 3 | GO:0044238 | primary metabolic process | 66/201 | 1.33 | 3.90e-03 | - | no |
| B | 3 | GO:0007275 | multicellular organismal development | 19/201 | 1.78 | 5.33e-03 | - | yes |
| C | 3 | GO:0012505 | endomembrane system | 82/201 | 3.36 | 1.57e-25 | - | no |
| C | 3 | GO:0044464 | cell part | 138/201 | 1.50 | 1.54e-11 | - | yes |
| C | 4 | GO:0031224 | intrinsic to membrane | 13/201 | 2.41 | 1.13e-03 | - | no |
| M | 5 | GO:0004091 | carboxylesterase activity | 19/201 | 9.44 | 2.02e-14 | - | no |
| M | 3 | GO:0016787 | hydrolase activity | 43/201 | 2.74 | 3.28e-10 | - | no |
| M | 3 | GO:0004857 | enzyme inhibitor activity | 11/201 | 10.46 | 7.93e-10 | - | no |
| M | 5 | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | 15/201 | 6.02 | 5.27e-09 | - | no |
| M | 4 | GO:0016788 | hydrolase activity, acting on ester bonds | 23/201 | 3.85 | 8.46e-09 | - | no |
| M | 4 | GO:0016798 | hydrolase activity, acting on glycosyl bonds | 15/201 | 5.61 | 1.41e-08 | - | no |
| M | 3 | GO:0016829 | lyase activity | 10/201 | 5.14 | 4.75e-06 | - | no |
| M | 4 | GO:0022804 | active transmembrane transporter activity | 10/201 | 2.93 | 6.90e-04 | - | no |
| M | 3 | GO:0016491 | oxidoreductase activity | 18/201 | 2.12 | 9.09e-04 | - | no |
| M | 3 | GO:0016740 | transferase activity | 27/201 | 1.64 | 3.90e-03 | - | no |
| M | 3 | GO:0022857 | transmembrane transporter activity | 12/201 | 2.13 | 4.68e-03 | - | no |
| M | 4 | GO:0022891 | substrate-specific transmembrane transporter activity | 10/201 | 2.26 | 5.25e-03 | - | no |
| M | 3 | GO:0022892 | substrate-specific transporter activity | 11/201 | 2.12 | 6.30e-03 | - | no |
| M | 5 | GO:0016301 | kinase activity | 15/201 | 1.85 | 7.55e-03 | - | no |
| PS | 4 | PO:0006345 | pollen tube | 94/201 | 3.21 | 1.82e-28 | - | no |
| PS | 3 | PO:0009031 | sepal | 165/201 | 1.78 | 1.17e-26 | - | no |
| PS | 3 | PO:0009032 | petal | 158/201 | 1.79 | 1.16e-24 | - | no |
| PS | 5 | PO:0009046 | flower | 171/201 | 1.64 | 6.70e-24 | 1.14E-17 | yes |
| PS | 4 | PO:0009049 | inflorescence | 171/201 | 1.63 | 1.57e-23 | - | yes |
| PS | 5 | PO:0008034 | leaf whorl | 161/201 | 1.70 | 1.24e-22 | - | no |
| PS | 4 | PO:0008033 | phyllome whorl | 161/201 | 1.70 | 1.24e-22 | - | no |
| PS | 3 | PO:0009006 | shoot | 172/201 | 1.58 | 5.23e-22 | - | yes |
| PS | 3 | PO:0006001 | phyllome | 167/201 | 1.62 | 6.49e-22 | - | no |
| PS | 3 | PO:0020091 | male gametophyte | 138/201 | 1.66 | 1.73e-15 | - | no |
| PS | 4 | PO:0009026 | sporophyll | 139/201 | 1.54 | 1.27e-12 | - | no |
| PS | 5 | PO:0009028 | microsporophyll | 126/201 | 1.50 | 9.46e-10 | - | no |
| PS | 5 | PO:0009027 | megasporophyll | 124/201 | 1.47 | 5.79e-09 | - | no |
| PS | 3 | PO:0009010 | seed | 131/201 | 1.33 | 1.15e-06 | - | no |
| PS | 4 | PO:0009001 | fruit | 131/201 | 1.33 | 1.63e-06 | - | no |
| PS | 3 | PO:0006342 | infructescence | 131/201 | 1.33 | 1.63e-06 | - | no |
| PS | 4 | PO:0009009 | embryo | 122/201 | 1.26 | 1.57e-04 | - | no |
| PG | 5 | PO:0007605 | androecium developmental stages | 100/201 | 3.40 | 8.24e-33 | - | no |
| PG | 4 | PO:0007600 | 3 floral organ development stages | 172/201 | 1.68 | 5.83e-26 | - | no |
| PG | 3 | PO:0007615 | flower development stages | 174/201 | 1.65 | 9.15e-26 | - | no |
| PG | 4 | PO:0007616 | 4 anthesis | 164/201 | 1.68 | 4.30e-23 | - | no |
| PG | 5 | PO:0007604 | corolla developmental stages | 164/201 | 1.65 | 4.54e-22 | - | no |
| PG | 3 | PO:0001170 | seed development stages | 129/201 | 1.42 | 2.04e-08 | - | yes |
| PG | 4 | PO:0007631 | embryo development stages | 128/201 | 1.41 | 3.35e-08 | - | no |
| PG | 5 | PO:0001185 | C globular stage | 114/201 | 1.38 | 2.55e-06 | - | no |
| KW | 0 | anthesis | - | 120/201 | 9.09 | 5.93e-90 | - | no |
| KW | 0 | petal | - | 121/201 | 8.25 | 6.95e-86 | - | no |
| KW | 0 | expansion | - | 120/201 | 8.12 | 3.38e-84 | - | no |
| KW | 0 | differentiation | - | 120/201 | 7.90 | 9.38e-83 | - | no |
| KW | 0 | stage | - | 130/201 | 6.68 | 2.16e-82 | - | no |
| KW | 0 | globular | - | 74/201 | 19.62 | 1.12e-76 | - | no |
| KW | 0 | germinated | - | 82/201 | 14.75 | 5.08e-75 | - | no |
| KW | 0 | pollen | - | 91/201 | 10.15 | 3.16e-69 | - | no |
| KW | 0 | mature | - | 90/201 | 10.01 | 7.20e-68 | - | no |
| KW | 0 | endomembrane | - | 82/201 | 3.45 | 2.44e-26 | - | no |
| KW | 0 | system | - | 82/201 | 3.37 | 1.30e-25 | 2.91E-15 | no |
| KW | 0 | lipid | - | 24/201 | 6.95 | 1.37e-14 | - | no |
| KW | 0 | inhibitor | - | 21/201 | 6.99 | 4.66e-13 | - | no |
| KW | 0 | sepal | - | 18/201 | 8.30 | 8.82e-13 | - | no |
| KW | 0 | whorl | - | 17/201 | 7.23 | 3.31e-11 | - | no |
| KW | 0 | hydrolase | - | 29/201 | 3.96 | 6.17e-11 | - | no |
| KW | 0 | ipr001087 | - | 10/201 | 14.77 | 9.21e-11 | - | no |
| KW | 0 | pectin | - | 13/201 | 8.54 | 5.17e-10 | - | no |
| KW | 0 | metabolic | - | 34/201 | 2.95 | 4.11e-09 | 7.47E-16 | no |
| KW | 0 | catalytic | - | 31/201 | 3.03 | 9.74e-09 | - | no |
| KW | 0 | glycoside | - | 15/201 | 5.67 | 1.24e-08 | 4.17E-17 | no |
| KW | 0 | active | - | 27/201 | 3.28 | 1.61e-08 | - | no |
| KW | 0 | lyase | - | 13/201 | 6.52 | 1.63e-08 | - | no |
| KW | 0 | process | - | 47/201 | 2.28 | 1.81e-08 | - | no |
| KW | 0 | lipase | - | 11/201 | 7.91 | 1.85e-08 | - | no |
| KW | 0 | storage | - | 10/201 | 8.75 | 2.40e-08 | - | no |
| KW | 0 | cation | - | 12/201 | 6.66 | 3.89e-08 | - | no |
| KW | 0 | compounds | - | 11/201 | 7.34 | 4.25e-08 | - | yes |
| KW | 0 | hydrolyzing | - | 11/201 | 7.00 | 7.12e-08 | - | no |
| KW | 0 | flower | - | 23/201 | 3.00 | 8.53e-07 | 1.14E-17 | yes |
| KW | 0 | carbohydrate | - | 15/201 | 3.81 | 2.57e-06 | - | no |
| KW | 0 | glycosyl | - | 15/201 | 3.50 | 7.38e-06 | - | no |
| KW | 0 | region | - | 30/201 | 2.07 | 5.11e-05 | 1.08E-15 | no |
| KW | 0 | oxidase | - | 10/201 | 3.62 | 1.16e-04 | - | no |
| KW | 0 | expanded | - | 13/201 | 2.96 | 1.47e-04 | - | no |
| KW | 0 | gametophyte | - | 12/201 | 3.04 | 1.87e-04 | - | no |
| KW | 0 | oxidoreductase | - | 13/201 | 2.78 | 2.87e-04 | - | no |
| KW | 0 | group | - | 14/201 | 2.59 | 3.85e-04 | 3.04E-15 | no |
| KW | 0 | terminal | - | 34/201 | 1.76 | 4.25e-04 | 6.83E-16 | no |
| KW | 0 | enzyme | - | 10/201 | 2.95 | 6.60e-04 | - | no |
| KW | 0 | member | - | 22/201 | 2.00 | 6.97e-04 | - | no |
| KW | 0 | subgroup | - | 11/201 | 2.70 | 8.91e-04 | - | no |
| KW | 0 | cotyledon | - | 13/201 | 2.46 | 9.41e-04 | - | no |
| KW | 0 | alpha | - | 16/201 | 2.18 | 1.18e-03 | - | no |
| KW | 0 | phosphorylation | - | 14/201 | 2.27 | 1.47e-03 | - | no |
| KW | 0 | biosynthetic | - | 14/201 | 1.95 | 5.96e-03 | - | no |
| (*1) | [B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description. |
| (*2) | ([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes]) |
| (*3) | P-values were calculated on hypergeometric distribution in which we found n genes with a annotation term during 200 highly correlated genes, while we had N genes with the term in the whole genes. |
| (*4) | PosMed is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions. |
Top Page
