AT3G44350.2http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u324435002000i
Other supporting information
| Gene Model | |
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| Correlation Plot | |
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Expression profile (Values are plotted in Log(2) values.)
Genes with related expresssion profiles.
| Positively Correlated Genes | ||||||
|---|---|---|---|---|---|---|
| Gens | PCC | Definition | Overlap gene | Definition | Overlap gene(antisense) | Definition |
| AT2G35590.1 | 0.869447 | pseudogene, serpin (serine protease inhibitor), putative, similar to protein zx (Hordeum vulgare subsp. vulgare) GI:19071, serpin (Triticum aestivum) GI:1885346 | - | - | - | - |
| AT2G06255.1 | 0.831113 | ELF4-L3 (ELF4-Like 3) | OMAT2P001380 | - | - | - |
| AT1G04690.1 | 0.802076 | KAB1 (POTASSIUM CHANNEL BETA SUBUNIT) | OMAT1P001470 | - | - | - |
| AT3G25090.1 | 0.781358 | F-box family protein-related | - | - | - | - |
| AT2G02210.1 | 0.780496 | transposable element gene | - | - | - | - |
| AT2G42550.1 | 0.778295 | protein kinase family protein | - | - | - | - |
| AT1G33820.1 | 0.771125 | unknown protein | - | - | - | - |
| AT1G20270.1 | 0.765819 | oxidoreductase, 2OG-Fe(II) oxygenase family protein | - | - | - | - |
| AT3G58170.1 | 0.762267 | BS14A (BET1P/SFT1P-LIKE PROTEIN 14A) | OMAT3P114430 | - | - | - |
| AT1G10100.1 | 0.75005 | unknown protein | - | - | - | - |
| Negatively Correlated Genes | ||||||
| Gens | PCC | Definition | Overlap gene | Definition | Overlap gene(antisense) | Definition |
| AT1G67328.1 | -0.765386 | other RNA | - | - | OMAT1P018740 | - |
| AT1G59725.1 | -0.706321 | DNAJ heat shock protein, putative | - | - | - | - |
| ath-MIR169d | -0.681274 | ath-MIR169d | - | - | - | - |
| AT1G53683.1 | -0.681274 | MIR169D | - | - | - | - |
| AT3G02315.1 | -0.663995 | pre-tRNA | - | - | - | - |
| AT1G21510.1 | -0.663431 | unknown protein | - | - | - | - |
| AT5G05598.1 | -0.662757 | Encodes a Defensin-like (DEFL) family protein | - | - | - | - |
| AT5G34858.1 | -0.651334 | transposable element gene | - | - | - | - |
| AT1G10652.1 | -0.648322 | unknown protein | - | - | - | - |
| AT3G43950.1 | -0.645305 | phosphotransferase, alcohol group as acceptor | - | - | - | - |
Get whole results
Over-Representation Analysis Result
| p-value | <= 1.00e-06 | :20 terms with high significance | |
| 1.00e-06 < | p-value | <= 8.76e-06 | :With considering multiple testing correction; p <= 1.00e-02 / 1142 |
| 8.76e-06 < | p-value | <= 1.00e-02 |
| Type of term (*1) | Depth of the term in ontology tree | ID/Term | Description | Number of genes | Over-Representative rate (*2) | p-value (*3) | PosMed p-value (*4) (Link to PosMed) | Found on gene annotation |
|---|---|---|---|---|---|---|---|---|
| KW | 0 | biological_process | - | 81/200 | 1.36 | 5.18e-04 | - | no |
| KW | 0 | molecular_function | - | 66/200 | 1.31 | 5.43e-03 | - | no |
| KW | 0 | cellular_component | - | 64/200 | 1.31 | 5.61e-03 | - | yes |
| KW | 0 | pseudogene | - | 18/200 | 1.75 | 7.80e-03 | - | no |
| (*1) | [KW]:words found in gene description. |
| (*2) | ([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes]) |
| (*3) | P-values were calculated on hypergeometric distribution in which we found n genes with a annotation term during 200 highly correlated genes, while we had N genes with the term in the whole genes. |
| (*4) | PosMed is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions. |
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