AT1G10590

http://metadb.riken.jp/db/SciNetS_rib102i/crib102u0rib102u10000010590i

AT1G10590

TAIR10 Locus

status_type

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u5i

description

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u13i

• Nucleic acid-binding, OB-fold-like protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT1G23750.1); Has 250 Blast hits to 250 proteins in 60 species: Archae - 55; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).

label

http://www.w3.org/2000/01/rdf-schema#label

• AT1G10590

attributionURL

http://creativecommons.org/ns#attributionURL

• http://arabidopsis.org/servlets/TairObject?type=locus&name=AT1G10590

locus region

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u3i

• Chr1:3502004-3503457 -
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u2rib102u9338i

gene type

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u17i

• protein_coding
  http://metadb.riken.jp/db/SciNetS_ria253i/cria253u10i

species

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u18i

• Arabidopsis thaliana
  http://metadb.riken.jp/db/SciNetS_rib166i/crib166u26rib166u3702i

seeAlso

http://www.w3.org/2000/01/rdf-schema#seeAlso

• http://database.riken.jp/sw/item/crib102u0rib102u10000010590i

synonym

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u14i

relationship

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u6i

TAIR10 Gene Model

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u2i

• AT1G10590.1
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u10000105901i
• AT1G10590.2
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u10000105902i
• AT1G10590.3
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u10000105903i

RARGE Transposon Mutant

http://metadb.riken.jp/db/SciNetS_ria10i/pria10s1i

• 11-0449-1
  http://metadb.riken.jp/db/SciNetS_ria10i/cria10s1ria10u1104491i
• 13-0791-1
  http://metadb.riken.jp/db/SciNetS_ria10i/cria10s1ria10u1307911i
• 13-1838-1
  http://metadb.riken.jp/db/SciNetS_ria10i/cria10s1ria10u1318381i
• 13-3467-1
  http://metadb.riken.jp/db/SciNetS_ria10i/cria10s1ria10u1334671i
• 13-1272-1
  http://metadb.riken.jp/db/SciNetS_ria10i/cria10s1ria10u1312721i

RAFL cDNA

http://metadb.riken.jp/db/SciNetS_ria11i/pria11s1i

• RAFL04-12-H13
  http://metadb.riken.jp/db/SciNetS_ria11i/cria11s1ria11u487i
• RAFL05-01-D02
  http://metadb.riken.jp/db/SciNetS_ria11i/cria11s1ria11u1228i

TAIR_gene_model (on ARTADE2DB) (ver. TAIR9)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• AT1G10590.1
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u121059001000i
• AT1G10590.3
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u121059003000i
• AT1G10590.2
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u121059002000i

Genes with tiling-array support (Annotated)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• AT1G10590.1
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u121059001000i
• AT1G10590.3
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u121059003000i
• AT1G10590.2
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u121059002000i

ARTADE2_Gene (Ver.20100511)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• OMAT1P103370
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s1ria227u101033700000i

TAIR によるGO注釈

http://metadb.riken.jp/db/SciNetS_ria269i/pria269u1i

• AT1G10590:located in:plasma membrane
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u7468i
• AT1G10590:involved in:biological_process
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u7469i

TAIRによるPO注釈（生育ステージ）

http://metadb.riken.jp/db/SciNetS_ria270i/pria270u1i

• AT1G10590:expressed during:LP.02 two leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u92962i
• AT1G10590:expressed during:LP.12 twelve leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u68666i
• AT1G10590:expressed during:C globular stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u41271i
• AT1G10590:expressed during:L mature pollen stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u177072i
• AT1G10590:expressed during:LP.04 four leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u117941i
• AT1G10590:expressed during:4 anthesis
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u160771i
• AT1G10590:expressed during:LP.10 ten leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u105283i
• AT1G10590:expressed during:petal differentiation and expansion stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u144278i
• AT1G10590:expressed during:M germinated pollen stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u181002i
• AT1G10590:expressed during:LP.08 eight leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u80800i
• AT1G10590:expressed during:F mature embryo stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u27947i
• AT1G10590:expressed during:E expanded cotyledon stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u14090i
• AT1G10590:expressed during:LP.06 six leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u131567i
• AT1G10590:expressed during:4 leaf senescence stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u1181i
• AT1G10590:expressed during:D bilateral stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u54982i

TAIRによるPO注釈（器官名）

http://metadb.riken.jp/db/SciNetS_ria273i/pria273u1i

• AT1G10590:expressed in:sepal
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u155115i
• AT1G10590:expressed in:cultured cell
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u299399i
• AT1G10590:expressed in:stem
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u201230i
• AT1G10590:expressed in:shoot apex
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u17535i
• AT1G10590:expressed in:seed
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u99280i
• AT1G10590:expressed in:sperm cell
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u300860i
• AT1G10590:expressed in:shoot system
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u71767i
• AT1G10590:expressed in:inflorescence meristem
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u31799i
• AT1G10590:expressed in:fruit
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u3336i
• AT1G10590:expressed in:petal
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u170482i
• AT1G10590:expressed in:petiole
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u240628i
• AT1G10590:expressed in:collective leaf structure
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u280181i
• AT1G10590:expressed in:pedicel
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u214950i
• AT1G10590:expressed in:leaf lamina base
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u44755i
• AT1G10590:expressed in:vascular leaf
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u3669i
• AT1G10590:expressed in:flower
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u185154i
• AT1G10590:expressed in:leaf apex
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u267212i
• AT1G10590:expressed in:hypocotyl
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u253132i
• AT1G10590:expressed in:carpel
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u141138i
• AT1G10590:expressed in:cauline leaf
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u4632i
• AT1G10590:expressed in:embryo
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u84554i
• AT1G10590:expressed in:cotyledon
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u228464i
• AT1G10590:expressed in:stamen
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u127223i
• AT1G10590:expressed in:root
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u57445i

A.thaliana cDNA

http://metadb.riken.jp/db/SciNetS_ria277i/pria277u2i

• NM_179301
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u45390i
• AY113861
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u8933i
• RAFL04-12-H13
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u48265i
• RAFL05-01-D02
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u48732i
• NM_100935
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u26568i
• NM_179302
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u45391i

Ds Mapping Information to TAIR10

http://metadb.riken.jp/db/SciNetS_ria278i/pria278u13i

• 11-0449-1_G-edge.1
  http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u319i

AT_TAIR_gene

http://metadb.riken.jp/db/SciNetS_rib101i/prib101s4i

• AT1G10590.2
  http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u10000105902i
• AT1G10590.1
  http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u10000105901i
• AT1G10590.3
  http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u10000105903i

RIKEN A.thaliana gene family

http://metadb.riken.jp/db/SciNetS_rib123i/prib123s1i

• Cluster1228
  http://metadb.riken.jp/db/SciNetS_rib123i/crib123s1rib123u1228i

Domain Annotation(A.thaliana)

http://metadb.riken.jp/db/SciNetS_rib126i/prib126u1i

• tRNA_anti
  http://metadb.riken.jp/db/SciNetS_rib126i/crib126u1rib126u177i

RIKEN Ortholog(A.thaliana and Rice)

http://metadb.riken.jp/db/SciNetS_rib127i/prib127u1i

• At-Os_Ortholog7754
  http://metadb.riken.jp/db/SciNetS_rib127i/crib127u1rib127u7754i