AT1G13100

http://metadb.riken.jp/db/SciNetS_rib102i/crib102u0rib102u10000013100i

AT1G13100

TAIR10 Locus

status_type

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u5i

description

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u13i

• "cytochrome P450, family 71, subfamily B, polypeptide 29" (CYP71B29); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: cotyledon, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 28 (TAIR:AT1G13090.1); Has 32382 Blast hits to 32119 proteins in 1696 species: Archae - 46; Bacteria - 3118; Metazoa - 11830; Fungi - 6731; Plants - 9528; Viruses - 0; Other Eukaryotes - 1129 (source: NCBI BLink).

label

http://www.w3.org/2000/01/rdf-schema#label

• AT1G13100

attributionURL

http://creativecommons.org/ns#attributionURL

• http://arabidopsis.org/servlets/TairObject?type=locus&name=AT1G13100

locus region

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u3i

• Chr1:4463924-4465538 +
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u2rib102u18626i

gene type

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u17i

• protein_coding
  http://metadb.riken.jp/db/SciNetS_ria253i/cria253u10i

species

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u18i

• Arabidopsis thaliana
  http://metadb.riken.jp/db/SciNetS_rib166i/crib166u26rib166u3702i

seeAlso

http://www.w3.org/2000/01/rdf-schema#seeAlso

• http://database.riken.jp/sw/item/crib102u0rib102u10000013100i

synonym

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u14i

• "cytochrome P450, family 71, subfamily B, polypeptide 29"
• CYP71B29

relationship

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u6i

TAIR10 Gene Model

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u2i

• AT1G13100.1
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u10000131001i

RARGE Transposon Mutant

http://metadb.riken.jp/db/SciNetS_ria10i/pria10s1i

• 13-1326-1
  http://metadb.riken.jp/db/SciNetS_ria10i/cria10s1ria10u1313261i
• 13-0288-1
  http://metadb.riken.jp/db/SciNetS_ria10i/cria10s1ria10u1302881i

RAFL cDNA

http://metadb.riken.jp/db/SciNetS_ria11i/pria11s1i

• RAFL16-82-L13
  http://metadb.riken.jp/db/SciNetS_ria11i/cria11s1ria11u14676i

Swiss-Prot Plants

http://metadb.riken.jp/db/SciNetS_ria214i/pria214u4i

• C71BT_ARATH
  http://metadb.riken.jp/db/SciNetS_ria214i/cria214s6ria214u2692810144i

ARTADE2_Gene (Ver.20100511)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• OMAT1P004600
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s1ria227u100046000000i

TAIR_gene_model (on ARTADE2DB) (ver. TAIR9)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• AT1G13100.1
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u121310001000i

Genes with tiling-array support (Annotated)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• AT1G13100.1
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u121310001000i

TAIR によるGO注釈

http://metadb.riken.jp/db/SciNetS_ria269i/pria269u1i

• AT1G13100:functions in:oxygen binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u9272i
• AT1G13100:involved in:response to nitrate
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u9277i
• AT1G13100:has:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u9280i
• AT1G13100:has:electron carrier activity
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u9279i
• AT1G13100:has:iron ion binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u9274i
• AT1G13100:involved in:oxidation-reduction process
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u9273i
• AT1G13100:involved in:nitrate transport
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u9276i
• AT1G13100:located in:plasmodesma
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u9275i
• AT1G13100:has:heme binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u9278i

TAIRによるPO注釈（器官名）

http://metadb.riken.jp/db/SciNetS_ria273i/pria273u1i

• AT1G13100:expressed in:hypocotyl
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u253275i
• AT1G13100:expressed in:cotyledon
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u299126i
• AT1G13100:expressed in:root
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u57588i

A.thaliana cDNA

http://metadb.riken.jp/db/SciNetS_ria277i/pria277u2i

• RAFL16-82-L13
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u56336i
• NM_101180
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u26804i

Ds Mapping Information to TAIR10

http://metadb.riken.jp/db/SciNetS_ria278i/pria278u13i

• 52-1038-1_H-edge.1
  http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u20814i
• 13-1326-1_H-edge.1
  http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u9298i
• 52-1038-1_G-edge.1
  http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u20813i

AT_TAIR_gene

http://metadb.riken.jp/db/SciNetS_rib101i/prib101s4i

• AT1G13100.1
  http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u10000131001i

RIKEN A.thaliana gene family

http://metadb.riken.jp/db/SciNetS_rib123i/prib123s1i

• Cluster5
  http://metadb.riken.jp/db/SciNetS_rib123i/crib123s1rib123u5i

RIKEN A.thaliana gene family (tandem)

http://metadb.riken.jp/db/SciNetS_rib123i/prib123s1i

• tandem cluster64
  http://metadb.riken.jp/db/SciNetS_rib123i/crib123s2rib123u64i

Domain Annotation(A.thaliana)

http://metadb.riken.jp/db/SciNetS_rib126i/prib126u1i

• p450
  http://metadb.riken.jp/db/SciNetS_rib126i/crib126u1rib126u75i

RIKEN Ortholog(A.thaliana and Rice)

http://metadb.riken.jp/db/SciNetS_rib127i/prib127u1i

• At-Os_Ortholog5384
  http://metadb.riken.jp/db/SciNetS_rib127i/crib127u1rib127u5384i