AT1G62670

http://metadb.riken.jp/db/SciNetS_rib102i/crib102u0rib102u10000062670i

AT1G62670

TAIR10 Locus

status_type

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u5i

description

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u13i

• rna processing factor 2 (RPF2); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G62930.1); Has 71790 Blast hits to 15506 proteins in 316 species: Archae - 6; Bacteria - 84; Metazoa - 1433; Fungi - 1460; Plants - 65974; Viruses - 0; Other Eukaryotes - 2833 (source: NCBI BLink).

label

http://www.w3.org/2000/01/rdf-schema#label

• AT1G62670

attributionURL

http://creativecommons.org/ns#attributionURL

• http://arabidopsis.org/servlets/TairObject?type=locus&name=AT1G62670

locus region

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u3i

• Chr1:23204773-23206665 -
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u2rib102u2037i

gene type

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u17i

• protein_coding
  http://metadb.riken.jp/db/SciNetS_ria253i/cria253u10i

species

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u18i

• Arabidopsis thaliana
  http://metadb.riken.jp/db/SciNetS_rib166i/crib166u26rib166u3702i

seeAlso

http://www.w3.org/2000/01/rdf-schema#seeAlso

• http://database.riken.jp/sw/item/crib102u0rib102u10000062670i

synonym

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u14i

• rna processing factor 2
• RPF2

relationship

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u6i

TAIR10 Gene Model

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u2i

• AT1G62670.1
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u10000626701i

RARGE Transposon Mutant

http://metadb.riken.jp/db/SciNetS_ria10i/pria10s1i

• 12-2135-1
  http://metadb.riken.jp/db/SciNetS_ria10i/cria10s1ria10u1221351i

シロイヌナズナ変異株観察情報

http://metadb.riken.jp/db/SciNetS_ria143i/pria143u5i

• Z040031_obs_2 (Activation tagging line)
  http://metadb.riken.jp/db/SciNetS_ria143i/cria143u1ria143u1640i

Swiss-Prot Plants

http://metadb.riken.jp/db/SciNetS_ria214i/pria214u4i

• PPR91_ARATH
  http://metadb.riken.jp/db/SciNetS_ria214i/cria214s6ria214u2692833131i

TAIR_gene_model (on ARTADE2DB) (ver. TAIR9)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• AT1G62670.1
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u126267001000i

TAIR によるGO注釈

http://metadb.riken.jp/db/SciNetS_ria269i/pria269u1i

• AT1G62670:functions in:RNA binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u33669i
• AT1G62670:involved in:RNA 5'-end processing
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u33670i
• AT1G62670:located in:mitochondrion
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u33671i

TAIRによるPO注釈（生育ステージ）

http://metadb.riken.jp/db/SciNetS_ria270i/pria270u1i

• AT1G62670:expressed during:E expanded cotyledon stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u16089i
• AT1G62670:expressed during:F mature embryo stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u29868i
• AT1G62670:expressed during:0 germination
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u185917i
• AT1G62670:expressed during:D bilateral stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u56961i
• AT1G62670:expressed during:petal differentiation and expansion stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u146655i

TAIRによるPO注釈（器官名）

http://metadb.riken.jp/db/SciNetS_ria273i/pria273u1i

• AT1G62670:expressed in:collective leaf structure
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u282460i
• AT1G62670:expressed in:flower
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u187484i
• AT1G62670:expressed in:seed
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u101292i
• AT1G62670:expressed in:sepal
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u157326i
• AT1G62670:expressed in:embryo
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u86667i

A.thaliana cDNA

http://metadb.riken.jp/db/SciNetS_ria277i/pria277u2i

• NM_104944
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u30168i

Ds Mapping Information to TAIR10

http://metadb.riken.jp/db/SciNetS_ria278i/pria278u13i

• 12-2135-1_H-edge.1
  http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u6337i
• 12-2135-1_G-edge.1
  http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u6336i

タグ

http://database.riken.jp/sw/act_tag.owl#locus

• Z040031_tag_1
  http://metadb.riken.jp/db/SciNetS_ria37i/cria37u2ria37u649i

AT_TAIR_gene

http://metadb.riken.jp/db/SciNetS_rib101i/prib101s4i

• AT1G62670.1
  http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u10000626701i

RIKEN A.thaliana gene family

http://metadb.riken.jp/db/SciNetS_rib123i/prib123s1i

• Cluster9
  http://metadb.riken.jp/db/SciNetS_rib123i/crib123s1rib123u9i

RIKEN A.thaliana gene family (tandem)

http://metadb.riken.jp/db/SciNetS_rib123i/prib123s1i

• tandem cluster91
  http://metadb.riken.jp/db/SciNetS_rib123i/crib123s2rib123u91i

Domain Annotation(A.thaliana)

http://metadb.riken.jp/db/SciNetS_rib126i/prib126u1i

• PPR
  http://metadb.riken.jp/db/SciNetS_rib126i/crib126u1rib126u29i

RIKEN Ortholog(A.thaliana and Rice)

http://metadb.riken.jp/db/SciNetS_rib127i/prib127u1i

• At-Os_Ortholog2380
  http://metadb.riken.jp/db/SciNetS_rib127i/crib127u1rib127u2380i

RIKEN Ds transposon line

http://metadb.riken.jp/db/SciNetS_rib32i/prib32s1i

• 12-2135-1
  http://metadb.riken.jp/db/SciNetS_rib32i/crib32s19rib32s808i