A.thaliana locus
TAIR10 Locus
AT3G48500
http://metadb.riken.jp/db/SciNetS_rib102i/crib102u0rib102u30000048500i
AT3G48500(TAIR10 Locus)
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AT3G48500
TAIR10 Locus
status_type
http://metadb.riken.jp/db/SciNetS_rib102i/prib102u5i
description
http://metadb.riken.jp/db/SciNetS_rib99i/prib99u13i
PIGMENT DEFECTIVE 312 (PDE312); LOCATED IN: plastid chromosome, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027); Has 95 Blast hits to 93 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 14; Plants - 42; Viruses - 14; Other Eukaryotes - 20 (source: NCBI BLink).
label
http://www.w3.org/2000/01/rdf-schema#label
AT3G48500
attributionURL
http://creativecommons.org/ns#attributionURL
http://arabidopsis.org/servlets/TairObject?type=locus&name=AT3G48500
locus region
http://metadb.riken.jp/db/SciNetS_rib102i/prib102u3i
Chr3:17962163-17965613 +
http://metadb.riken.jp/db/SciNetS_rib102i/crib102u2rib102u10522i
gene type
http://metadb.riken.jp/db/SciNetS_rib99i/prib99u17i
protein_coding
http://metadb.riken.jp/db/SciNetS_ria253i/cria253u10i
species
http://metadb.riken.jp/db/SciNetS_rib99i/prib99u18i
Arabidopsis thaliana
http://metadb.riken.jp/db/SciNetS_rib166i/crib166u26rib166u3702i
seeAlso
http://www.w3.org/2000/01/rdf-schema#seeAlso
http://database.riken.jp/sw/item/crib102u0rib102u30000048500i
synonym
http://metadb.riken.jp/db/SciNetS_rib99i/prib99u14i
PTAC10
PDE312
PIGMENT DEFECTIVE 312
PLASTID TRANSCRIPTIONALLY ACTIVE 10
relationship
http://metadb.riken.jp/db/SciNetS_rib102i/prib102u6i
TAIR10 Gene Model
http://metadb.riken.jp/db/SciNetS_rib102i/prib102u2i
AT3G48500.1
http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u30000485001i
AT3G48500.2
http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u30000485002i
RAFL cDNA
http://metadb.riken.jp/db/SciNetS_ria11i/pria11s1i
RAFL17-26-N18
http://metadb.riken.jp/db/SciNetS_ria11i/cria11s1ria11u15091i
RAFL04-16-I09
http://metadb.riken.jp/db/SciNetS_ria11i/cria11s1ria11u837i
TAIR_gene_model (on ARTADE2DB) (ver. TAIR9)
http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i
AT3G48500.1
http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u324850001000i
AT3G48500.2
http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u324850002000i
Genes with tiling-array support (Annotated)
http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i
AT3G48500.1
http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u324850001000i
AT3G48500.2
http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u324850002000i
ARTADE2_Gene (Ver.20100511)
http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i
OMAT3P012710
http://metadb.riken.jp/db/SciNetS_ria227i/cria227s1ria227u300127100000i
TAIR によるGO注釈
http://metadb.riken.jp/db/SciNetS_ria269i/pria269u1i
AT3G48500:located in:chloroplast
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u99972i
AT3G48500:has:RNA binding
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u99975i
AT3G48500:involved in:transcription from plastid promoter
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u99974i
AT3G48500:located in:nucleus
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u99971i
AT3G48500:located in:chloroplast stroma
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u99970i
AT3G48500:located in:nucleoid
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u99977i
AT3G48500:located in:plastid chromosome
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u99976i
AT3G48500:located in:cytosol
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u99978i
AT3G48500:involved in:positive regulation of transcription, DNA-dependent
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u99973i
TAIRによるPO注釈（生育ステージ）
http://metadb.riken.jp/db/SciNetS_ria270i/pria270u1i
AT3G48500:expressed during:F mature embryo stage
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u34678i
AT3G48500:expressed during:petal differentiation and expansion stage
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u152688i
AT3G48500:expressed during:C globular stage
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u48169i
AT3G48500:expressed during:LP.08 eight leaves visible
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u86952i
AT3G48500:expressed during:4 leaf senescence stage
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u7679i
AT3G48500:expressed during:LP.12 twelve leaves visible
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u74802i
AT3G48500:expressed during:4 anthesis
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u169032i
AT3G48500:expressed during:LP.04 four leaves visible
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u124879i
AT3G48500:expressed during:LP.02 two leaves visible
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u99188i
AT3G48500:expressed during:D bilateral stage
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u61928i
AT3G48500:expressed during:E expanded cotyledon stage
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u21102i
AT3G48500:expressed during:LP.06 six leaves visible
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u137922i
AT3G48500:expressed during:LP.10 ten leaves visible
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u111666i
TAIRによるPO注釈（器官名）
http://metadb.riken.jp/db/SciNetS_ria273i/pria273u1i
AT3G48500:expressed in:petiole
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u246928i
AT3G48500:expressed in:petal
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u177904i
AT3G48500:expressed in:stamen
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u134297i
AT3G48500:expressed in:flower
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u193380i
AT3G48500:expressed in:shoot apex
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u24785i
AT3G48500:expressed in:shoot system
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u78178i
AT3G48500:expressed in:cauline leaf
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u11136i
AT3G48500:expressed in:leaf apex
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u273704i
AT3G48500:expressed in:vascular leaf
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u120326i
AT3G48500:expressed in:carpel
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u148196i
AT3G48500:expressed in:cultured cell
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u306931i
AT3G48500:expressed in:inflorescence meristem
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u38398i
AT3G48500:expressed in:seed
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u106317i
AT3G48500:expressed in:sperm cell
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u303573i
AT3G48500:expressed in:stem
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u208210i
AT3G48500:expressed in:sepal
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u162930i
AT3G48500:expressed in:collective leaf structure
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u288180i
AT3G48500:expressed in:hypocotyl
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u260306i
AT3G48500:expressed in:root
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u64748i
AT3G48500:expressed in:embryo
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u91990i
AT3G48500:expressed in:pedicel
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u221804i
AT3G48500:expressed in:leaf lamina base
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u51134i
AT3G48500:expressed in:cotyledon
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u234603i
A.thaliana cDNA
http://metadb.riken.jp/db/SciNetS_ria277i/pria277u2i
NM_114708
http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u69145i
NM_001084790
http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u65414i
RAFL04-16-I09
http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u71399i
AK229521
http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u61111i
Ds Mapping Information to TAIR10
http://metadb.riken.jp/db/SciNetS_ria278i/pria278u13i
54-2737-1_G-edge.1
http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u27628i
12-2354-1_H-edge.1
http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u6458i
54-2737-1_H-edge.1
http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u27629i
12-2354-1_G-edge.1
http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u6457i
AT_TAIR_gene
http://metadb.riken.jp/db/SciNetS_rib101i/prib101s4i
AT3G48500.1
http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u30000485001i
AT3G48500.2
http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u30000485002i
RIKEN A.thaliana gene family
http://metadb.riken.jp/db/SciNetS_rib123i/prib123s1i
Cluster5462
http://metadb.riken.jp/db/SciNetS_rib123i/crib123s1rib123u5462i
RIKEN Ortholog(A.thaliana and Rice)
http://metadb.riken.jp/db/SciNetS_rib127i/prib127u1i
At-Os_Ortholog7535
http://metadb.riken.jp/db/SciNetS_rib127i/crib127u1rib127u7535i
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