A.thaliana locus
TAIR10 Locus
AT3G56170
http://metadb.riken.jp/db/SciNetS_rib102i/crib102u0rib102u30000056170i
AT3G56170(TAIR10 Locus)
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AT3G56170
TAIR10 Locus
status_type
http://metadb.riken.jp/db/SciNetS_rib102i/prib102u5i
description
http://metadb.riken.jp/db/SciNetS_rib99i/prib99u13i
Ca-2+ dependent nuclease (CAN); FUNCTIONS IN: nuclease activity; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Staphylococcal nuclease (SNase-like) (InterPro:IPR006021), Staphylococcal nuclease (SNase-like), OB-fold (InterPro:IPR016071), Thermonuclease active site (InterPro:IPR002071); BEST Arabidopsis thaliana protein match is: Staphylococcal nuclease homologue (TAIR:AT2G40410.2); Has 3061 Blast hits to 3061 proteins in 776 species: Archae - 16; Bacteria - 1825; Metazoa - 0; Fungi - 167; Plants - 86; Viruses - 2; Other Eukaryotes - 965 (source: NCBI BLink).
label
http://www.w3.org/2000/01/rdf-schema#label
AT3G56170
attributionURL
http://creativecommons.org/ns#attributionURL
http://arabidopsis.org/servlets/TairObject?type=locus&name=AT3G56170
locus region
http://metadb.riken.jp/db/SciNetS_rib102i/prib102u3i
Chr3:20842145-20844476 +
http://metadb.riken.jp/db/SciNetS_rib102i/crib102u2rib102u6957i
gene type
http://metadb.riken.jp/db/SciNetS_rib99i/prib99u17i
protein_coding
http://metadb.riken.jp/db/SciNetS_ria253i/cria253u10i
species
http://metadb.riken.jp/db/SciNetS_rib99i/prib99u18i
Arabidopsis thaliana
http://metadb.riken.jp/db/SciNetS_rib166i/crib166u26rib166u3702i
seeAlso
http://www.w3.org/2000/01/rdf-schema#seeAlso
http://database.riken.jp/sw/item/crib102u0rib102u30000056170i
synonym
http://metadb.riken.jp/db/SciNetS_rib99i/prib99u14i
Ca-2+ dependent nuclease
CAN
relationship
http://metadb.riken.jp/db/SciNetS_rib102i/prib102u6i
TAIR10 Gene Model
http://metadb.riken.jp/db/SciNetS_rib102i/prib102u2i
AT3G56170.1
http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u30000561701i
ARTADE2_Gene (Ver.20100511)
http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i
OMAT3P015630
http://metadb.riken.jp/db/SciNetS_ria227i/cria227s1ria227u300156300000i
TAIR_gene_model (on ARTADE2DB) (ver. TAIR9)
http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i
AT3G56170.1
http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u325617001000i
Genes with tiling-array support (Annotated)
http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i
AT3G56170.1
http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u325617001000i
TAIR によるGO注釈
http://metadb.riken.jp/db/SciNetS_ria269i/pria269u1i
AT3G56170:has:nuclease activity
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u105753i
AT3G56170:has:hydrolase activity, acting on ester bonds
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u105751i
AT3G56170:has protein modification of type:N-terminal protein myristoylation
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u105752i
AT3G56170:has:nucleic acid binding
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u105754i
TAIRによるPO注釈（生育ステージ）
http://metadb.riken.jp/db/SciNetS_ria270i/pria270u1i
AT3G56170:expressed during:LP.04 four leaves visible
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u125330i
AT3G56170:expressed during:4 anthesis
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u169545i
AT3G56170:expressed during:LP.08 eight leaves visible
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u87351i
AT3G56170:expressed during:petal differentiation and expansion stage
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u153211i
AT3G56170:expressed during:F mature embryo stage
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u35106i
AT3G56170:expressed during:LP.06 six leaves visible
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u138323i
AT3G56170:expressed during:LP.12 twelve leaves visible
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u75208i
AT3G56170:expressed during:D bilateral stage
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u62374i
AT3G56170:expressed during:4 leaf senescence stage
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u8102i
AT3G56170:expressed during:C globular stage
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u48599i
AT3G56170:expressed during:LP.02 two leaves visible
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u99597i
AT3G56170:expressed during:E expanded cotyledon stage
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u21545i
AT3G56170:expressed during:LP.10 ten leaves visible
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u112087i
TAIRによるPO注釈（器官名）
http://metadb.riken.jp/db/SciNetS_ria273i/pria273u1i
AT3G56170:expressed in:inflorescence meristem
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u38822i
AT3G56170:expressed in:collective leaf structure
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u288689i
AT3G56170:expressed in:hypocotyl
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u260762i
AT3G56170:expressed in:embryo
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u92463i
AT3G56170:expressed in:leaf apex
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u274125i
AT3G56170:expressed in:pedicel
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u222238i
AT3G56170:expressed in:sepal
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u163419i
AT3G56170:expressed in:petiole
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u247337i
AT3G56170:expressed in:seed
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u106766i
AT3G56170:expressed in:carpel
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u148644i
AT3G56170:expressed in:root
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u65211i
AT3G56170:expressed in:shoot system
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u78592i
AT3G56170:expressed in:leaf lamina base
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u51548i
AT3G56170:expressed in:stem
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u208645i
AT3G56170:expressed in:cotyledon
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u234998i
AT3G56170:expressed in:vascular leaf
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u120775i
AT3G56170:expressed in:stamen
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u134743i
AT3G56170:expressed in:shoot apex
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u25252i
AT3G56170:expressed in:petal
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u178374i
AT3G56170:expressed in:flower
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u193885i
AT3G56170:expressed in:cauline leaf
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u11555i
A.thaliana cDNA
http://metadb.riken.jp/db/SciNetS_ria277i/pria277u2i
D84226
http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u64623i
NM_115475
http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u69891i
Ds Mapping Information to TAIR10
http://metadb.riken.jp/db/SciNetS_ria278i/pria278u13i
52-1201-1_G-edge.1
http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u21083i
52-1201-1_H-edge.1
http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u21084i
AT_TAIR_gene
http://metadb.riken.jp/db/SciNetS_rib101i/prib101s4i
AT3G56170.1
http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u30000561701i
RIKEN A.thaliana gene family
http://metadb.riken.jp/db/SciNetS_rib123i/prib123s1i
Cluster2151
http://metadb.riken.jp/db/SciNetS_rib123i/crib123s1rib123u2151i
Domain Annotation(A.thaliana)
http://metadb.riken.jp/db/SciNetS_rib126i/prib126u1i
SNase
http://metadb.riken.jp/db/SciNetS_rib126i/crib126u1rib126u1528i
RIKEN Ortholog(A.thaliana and Rice)
http://metadb.riken.jp/db/SciNetS_rib127i/prib127u1i
At-Os_Ortholog6198
http://metadb.riken.jp/db/SciNetS_rib127i/crib127u1rib127u6198i
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