A.thaliana locus TAIR10 Locus

AT4G04940
http://metadb.riken.jp/db/SciNetS_rib102i/crib102u0rib102u40000004940i

AT4G04940(TAIR10 Locus)

URI表示モード

AT4G04940

TAIR10 Locus

status_type http://metadb.riken.jp/db/SciNetS_rib102i/prib102u5i

description http://metadb.riken.jp/db/SciNetS_rib99i/prib99u13i

transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: rRNA processing; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Small-subunit processome, Utp21 (InterPro:IPR007319), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G61210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

label http://www.w3.org/2000/01/rdf-schema#label

AT4G04940

attributionURL http://creativecommons.org/ns#attributionURL

http://arabidopsis.org/servlets/TairObject?type=locus&name=AT4G04940

locus region http://metadb.riken.jp/db/SciNetS_rib102i/prib102u3i

Chr4:2511028-2517193 -
http://metadb.riken.jp/db/SciNetS_rib102i/crib102u2rib102u21699i

gene type http://metadb.riken.jp/db/SciNetS_rib99i/prib99u17i

protein_coding
http://metadb.riken.jp/db/SciNetS_ria253i/cria253u10i

species http://metadb.riken.jp/db/SciNetS_rib99i/prib99u18i

Arabidopsis thaliana
http://metadb.riken.jp/db/SciNetS_rib166i/crib166u26rib166u3702i

seeAlso http://www.w3.org/2000/01/rdf-schema#seeAlso

http://database.riken.jp/sw/item/crib102u0rib102u40000004940i

synonym http://metadb.riken.jp/db/SciNetS_rib99i/prib99u14i

relationship http://metadb.riken.jp/db/SciNetS_rib102i/prib102u6i

TAIR10 Gene Model http://metadb.riken.jp/db/SciNetS_rib102i/prib102u2i

AT4G04940.1
http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u40000049401i

RAFL cDNA http://metadb.riken.jp/db/SciNetS_ria11i/pria11s1i

RAFL07-07-D15
http://metadb.riken.jp/db/SciNetS_ria11i/cria11s1ria11u4687i

TAIR_gene_model (on ARTADE2DB) (ver. TAIR9) http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

AT4G04940.1
http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u420494001000i

Genes with tiling-array support (Annotated) http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

AT4G04940.1
http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u420494001000i

ARTADE2_Gene (Ver.20100511) http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

OMAT4P101390
http://metadb.riken.jp/db/SciNetS_ria227i/cria227s1ria227u401013900000i

TAIR によるGO注釈 http://metadb.riken.jp/db/SciNetS_ria269i/pria269u1i

TAIRによるPO注釈（生育ステージ） http://metadb.riken.jp/db/SciNetS_ria270i/pria270u1i

TAIRによるPO注釈（器官名） http://metadb.riken.jp/db/SciNetS_ria273i/pria273u1i

A.thaliana cDNA http://metadb.riken.jp/db/SciNetS_ria277i/pria277u2i

AT_TAIR_gene http://metadb.riken.jp/db/SciNetS_rib101i/prib101s4i

AT4G04940.1
http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u40000049401i

RIKEN A.thaliana gene family http://metadb.riken.jp/db/SciNetS_rib123i/prib123s1i

Cluster4779
http://metadb.riken.jp/db/SciNetS_rib123i/crib123s1rib123u4779i

Domain Annotation(A.thaliana) http://metadb.riken.jp/db/SciNetS_rib126i/prib126u1i

RIKEN Ortholog(A.thaliana and Rice) http://metadb.riken.jp/db/SciNetS_rib127i/prib127u1i

At-Os_Ortholog6441
http://metadb.riken.jp/db/SciNetS_rib127i/crib127u1rib127u6441i