AT4G10680

http://metadb.riken.jp/db/SciNetS_rib102i/crib102u0rib102u40000010680i

AT4G10680

TAIR10 Locus

status_type

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u5i

description

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u13i

• transcription factor IIB (TFIIB) family protein; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription regulator activity, zinc ion binding, translation initiation factor activity; INVOLVED IN: translational initiation, regulation of transcription, DNA-dependent, transcription initiation, regulation of transcription; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Zinc finger, TFIIB-type (InterPro:IPR013137), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin-like family protein (TAIR:AT3G29380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

label

http://www.w3.org/2000/01/rdf-schema#label

• AT4G10680

attributionURL

http://creativecommons.org/ns#attributionURL

• http://arabidopsis.org/servlets/TairObject?type=locus&name=AT4G10680

locus region

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u3i

• Chr4:6587521-6588069 +
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u2rib102u31648i

gene type

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u17i

• protein_coding
  http://metadb.riken.jp/db/SciNetS_ria253i/cria253u10i

species

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u18i

• Arabidopsis thaliana
  http://metadb.riken.jp/db/SciNetS_rib166i/crib166u26rib166u3702i

seeAlso

http://www.w3.org/2000/01/rdf-schema#seeAlso

• http://database.riken.jp/sw/item/crib102u0rib102u40000010680i

synonym

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u14i

relationship

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u6i

TAIR10 Gene Model

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u2i

• AT4G10680.1
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u40000106801i

TAIR_gene_model (on ARTADE2DB) (ver. TAIR9)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• AT4G10680.1
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u421068001000i

TAIR によるGO注釈

http://metadb.riken.jp/db/SciNetS_ria269i/pria269u1i

• AT4G10680:involved in:translational initiation
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u116384i
• AT4G10680:has:zinc ion binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u116387i
• AT4G10680:has:translation initiation factor activity
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u116383i
• AT4G10680:involved in:transcription initiation, DNA-dependent
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u116385i
• AT4G10680:involved in:regulation of transcription, DNA-dependent
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u116382i
• AT4G10680:located in:nucleus
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u116386i

A.thaliana cDNA

http://metadb.riken.jp/db/SciNetS_ria277i/pria277u2i

• NM_117136
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u32625i

AT_TAIR_gene

http://metadb.riken.jp/db/SciNetS_rib101i/prib101s4i

• AT4G10680.1
  http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u40000106801i

RIKEN A.thaliana gene family

http://metadb.riken.jp/db/SciNetS_rib123i/prib123s1i

• Cluster1164
  http://metadb.riken.jp/db/SciNetS_rib123i/crib123s1rib123u1164i

Domain Annotation(A.thaliana)

http://metadb.riken.jp/db/SciNetS_rib126i/prib126u1i

• TFIIB_Zn_Ribbon
  http://metadb.riken.jp/db/SciNetS_rib126i/crib126u1rib126u1714i
• TFIIB
  http://metadb.riken.jp/db/SciNetS_rib126i/crib126u1rib126u1701i

RIKEN Ortholog(A.thaliana and Rice)

http://metadb.riken.jp/db/SciNetS_rib127i/prib127u1i

• At-Os_Ortholog10363
  http://metadb.riken.jp/db/SciNetS_rib127i/crib127u1rib127u10363i