AT4G13870

http://metadb.riken.jp/db/SciNetS_rib102i/crib102u0rib102u40000013870i

AT4G13870

TAIR10 Locus

status_type

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u5i

description

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u13i

• Werner syndrome-like exonuclease (WRNEXO); FUNCTIONS IN: protein binding, 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT4G13885.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

label

http://www.w3.org/2000/01/rdf-schema#label

• AT4G13870

attributionURL

http://creativecommons.org/ns#attributionURL

• http://arabidopsis.org/servlets/TairObject?type=locus&name=AT4G13870

locus region

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u3i

• Chr4:8023319-8025582 -
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u2rib102u6394i

gene type

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u17i

• protein_coding
  http://metadb.riken.jp/db/SciNetS_ria253i/cria253u10i

species

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u18i

• Arabidopsis thaliana
  http://metadb.riken.jp/db/SciNetS_rib166i/crib166u26rib166u3702i

seeAlso

http://www.w3.org/2000/01/rdf-schema#seeAlso

• http://database.riken.jp/sw/item/crib102u0rib102u40000013870i

synonym

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u14i

• ATWRNEXO
• Werner syndrome-like exonuclease
• WEX
• WRNEXO
• ATWEX

relationship

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u6i

TAIR10 Gene Model

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u2i

• AT4G13870.2
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u40000138702i
• AT4G13870.1
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u40000138701i

Swiss-Prot Plants

http://metadb.riken.jp/db/SciNetS_ria214i/pria214u4i

• WEX_ARATH
  http://metadb.riken.jp/db/SciNetS_ria214i/cria214s6ria214u2680421173i

TAIR_gene_model (on ARTADE2DB) (ver. TAIR9)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• AT4G13870.1
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u421387001000i
• AT4G13870.2
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u421387002000i

TAIR によるGO注釈

http://metadb.riken.jp/db/SciNetS_ria269i/pria269u1i

• AT4G13870:functions in:nucleic acid binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u118485i
• AT4G13870:located in:nucleus
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u118492i
• AT4G13870:has:nucleic acid binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u118488i
• AT4G13870:involved in:nucleobase-containing compound metabolic process
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u118490i
• AT4G13870:located in:intracellular
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u118489i
• AT4G13870:functions in:protein binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u118491i
• AT4G13870:has:3'-5' exonuclease activity
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u118487i
• AT4G13870:has:protein binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u118486i

A.thaliana cDNA

http://metadb.riken.jp/db/SciNetS_ria277i/pria277u2i

• NM_117461
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u32931i
• NM_202814
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u47439i
• BT010908
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u16657i
• AF531179
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u2217i

AT_TAIR_gene

http://metadb.riken.jp/db/SciNetS_rib101i/prib101s4i

• AT4G13870.2
  http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u40000138702i
• AT4G13870.1
  http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u40000138701i

RIKEN A.thaliana gene family

http://metadb.riken.jp/db/SciNetS_rib123i/prib123s1i

• Cluster7706
  http://metadb.riken.jp/db/SciNetS_rib123i/crib123s1rib123u7706i

Domain Annotation(A.thaliana)

http://metadb.riken.jp/db/SciNetS_rib126i/prib126u1i

• 3_5_exonuc
  http://metadb.riken.jp/db/SciNetS_rib126i/crib126u1rib126u72i

RIKEN Ortholog(A.thaliana and Rice)

http://metadb.riken.jp/db/SciNetS_rib127i/prib127u1i

• At-Os_Ortholog4890
  http://metadb.riken.jp/db/SciNetS_rib127i/crib127u1rib127u4890i