A.thaliana locus
TAIR10 Locus
AT5G12840
http://metadb.riken.jp/db/SciNetS_rib102i/crib102u0rib102u50000012840i
AT5G12840(TAIR10 Locus)
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AT5G12840
TAIR10 Locus
status_type
http://metadb.riken.jp/db/SciNetS_rib102i/prib102u5i
description
http://metadb.riken.jp/db/SciNetS_rib99i/prib99u13i
"nuclear factor Y, subunit A1" (NF-YA1); CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A9 (TAIR:AT3G20910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
label
http://www.w3.org/2000/01/rdf-schema#label
AT5G12840
attributionURL
http://creativecommons.org/ns#attributionURL
http://arabidopsis.org/servlets/TairObject?type=locus&name=AT5G12840
locus region
http://metadb.riken.jp/db/SciNetS_rib102i/prib102u3i
Chr5:4050691-4053606 -
http://metadb.riken.jp/db/SciNetS_rib102i/crib102u2rib102u27069i
gene type
http://metadb.riken.jp/db/SciNetS_rib99i/prib99u17i
protein_coding
http://metadb.riken.jp/db/SciNetS_ria253i/cria253u10i
species
http://metadb.riken.jp/db/SciNetS_rib99i/prib99u18i
Arabidopsis thaliana
http://metadb.riken.jp/db/SciNetS_rib166i/crib166u26rib166u3702i
seeAlso
http://www.w3.org/2000/01/rdf-schema#seeAlso
http://database.riken.jp/sw/item/crib102u0rib102u50000012840i
synonym
http://metadb.riken.jp/db/SciNetS_rib99i/prib99u14i
ATHAP2A
NF-YA1
EMBRYO DEFECTIVE 2220
"nuclear factor Y, subunit A1"
EMB2220
HAP2A
relationship
http://metadb.riken.jp/db/SciNetS_rib102i/prib102u6i
TAIR10 Gene Model
http://metadb.riken.jp/db/SciNetS_rib102i/prib102u2i
AT5G12840.2
http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u50000128402i
AT5G12840.4
http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u50000128404i
AT5G12840.1
http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u50000128401i
AT5G12840.3
http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u50000128403i
RAFL cDNA
http://metadb.riken.jp/db/SciNetS_ria11i/pria11s1i
RAFL05-01-E17
http://metadb.riken.jp/db/SciNetS_ria11i/cria11s1ria11u1233i
Swiss-Prot Plants
http://metadb.riken.jp/db/SciNetS_ria214i/pria214u4i
NFYA1_ARATH
http://metadb.riken.jp/db/SciNetS_ria214i/cria214s6ria214u2692133315i
ARTADE2_Gene (Ver.20100511)
http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i
OMAT5P103550
http://metadb.riken.jp/db/SciNetS_ria227i/cria227s1ria227u501035500000i
TAIR_gene_model (on ARTADE2DB) (ver. TAIR9)
http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i
AT5G12840.2
http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u521284002000i
AT5G12840.1
http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u521284001000i
AT5G12840.3
http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u521284003000i
AT5G12840.4
http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u521284004000i
Genes with tiling-array support (Annotated)
http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i
AT5G12840.2
http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u521284002000i
AT5G12840.1
http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u521284001000i
AT5G12840.3
http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u521284003000i
AT5G12840.4
http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u521284004000i
TAIR によるGO注釈
http://metadb.riken.jp/db/SciNetS_ria269i/pria269u1i
AT5G12840:has:sequence-specific DNA binding transcription factor activity
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u146755i
AT5G12840:involved in:seed development
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u146758i
AT5G12840:involved in:regulation of transcription, DNA-dependent
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u146751i
AT5G12840:involved in:embryo development ending in seed dormancy
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u146761i
AT5G12840:located in:nucleus
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u146756i
AT5G12840:is subunit of:CCAAT-binding factor complex
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u146752i
AT5G12840:involved in:microgametogenesis
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u146757i
AT5G12840:has:DNA binding
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u146753i
AT5G12840:involved in:regulation of timing of transition from vegetative to reproductive phase
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u146759i
AT5G12840:located in:CCAAT-binding factor complex
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u146750i
AT5G12840:involved in:somatic embryogenesis
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u146754i
AT5G12840:involved in:embryo development
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u146760i
TAIRによるPO注釈（生育ステージ）
http://metadb.riken.jp/db/SciNetS_ria270i/pria270u1i
AT5G12840:expressed during:LP.12 twelve leaves visible
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u77944i
AT5G12840:expressed during:LP.10 ten leaves visible
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u114936i
AT5G12840:expressed during:M germinated pollen stage
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u184550i
AT5G12840:expressed during:seedling growth
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u38i
AT5G12840:expressed during:LP.04 four leaves visible
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u128406i
AT5G12840:expressed during:4 leaf senescence stage
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u10994i
AT5G12840:expressed during:C globular stage
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u51698i
AT5G12840:expressed during:E expanded cotyledon stage
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u24660i
AT5G12840:expressed during:petal differentiation and expansion stage
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u156902i
AT5G12840:expressed during:4 anthesis
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u173169i
AT5G12840:expressed during:LP.06 six leaves visible
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u141156i
AT5G12840:expressed during:LP.08 eight leaves visible
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u90096i
AT5G12840:expressed during:D bilateral stage
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u65465i
AT5G12840:expressed during:F mature embryo stage
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u38107i
AT5G12840:expressed during:LP.02 two leaves visible
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u102378i
TAIRによるPO注釈（器官名）
http://metadb.riken.jp/db/SciNetS_ria273i/pria273u1i
AT5G12840:expressed in:flower
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u449i
AT5G12840:expressed in:carpel
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u151777i
AT5G12840:expressed in:leaf lamina base
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u54397i
AT5G12840:expressed in:collective leaf structure
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u292226i
AT5G12840:expressed in:petiole
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u250128i
AT5G12840:expressed in:stem
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u211710i
AT5G12840:expressed in:cotyledon
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u237756i
AT5G12840:expressed in:root
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u441i
AT5G12840:expressed in:embryo
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u95785i
AT5G12840:expressed in:cauline leaf
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u14441i
AT5G12840:expressed in:vascular leaf
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u445i
AT5G12840:expressed in:leaf apex
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u277015i
AT5G12840:expressed in:shoot system
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u81466i
AT5G12840:expressed in:inflorescence meristem
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u41715i
AT5G12840:expressed in:seed
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u109906i
AT5G12840:expressed in:petal
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u181637i
AT5G12840:expressed in:pedicel
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u225309i
AT5G12840:expressed in:hypocotyl
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u263952i
AT5G12840:expressed in:sepal
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u166872i
AT5G12840:expressed in:shoot apex
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u28473i
AT5G12840:expressed in:sperm cell
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u304971i
AT5G12840:expressed in:stamen
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u137831i
A.thaliana cDNA
http://metadb.riken.jp/db/SciNetS_ria277i/pria277u2i
BT025801
http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u19361i
NM_203044
http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u47662i
RAFL21-66-A21
http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u58071i
NM_180480
http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u46241i
NM_121287
http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u36584i
NM_203045
http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u47663i
RARGE Alternative splicing
http://metadb.riken.jp/db/SciNetS_ria3i/pria3s1i
ATU-5-0-03950
http://metadb.riken.jp/db/SciNetS_ria3i/cria3u1ria3u5003950i
RIKEN Arabidopsis Transcription Factor database
http://metadb.riken.jp/db/SciNetS_ria5i/pria5s1i
At5g12840
http://metadb.riken.jp/db/SciNetS_ria5i/cria5u1ria5u512840i
AT_TAIR_gene
http://metadb.riken.jp/db/SciNetS_rib101i/prib101s4i
AT5G12840.4
http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u50000128404i
AT5G12840.1
http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u50000128401i
AT5G12840.3
http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u50000128403i
AT5G12840.2
http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u50000128402i
RIKEN A.thaliana gene family
http://metadb.riken.jp/db/SciNetS_rib123i/prib123s1i
Cluster611
http://metadb.riken.jp/db/SciNetS_rib123i/crib123s1rib123u611i
Domain Annotation(A.thaliana)
http://metadb.riken.jp/db/SciNetS_rib126i/prib126u1i
CBFB_NFYA
http://metadb.riken.jp/db/SciNetS_rib126i/crib126u1rib126u471i
RIKEN Ortholog(A.thaliana and Rice)
http://metadb.riken.jp/db/SciNetS_rib127i/prib127u1i
At-Os_Ortholog7132
http://metadb.riken.jp/db/SciNetS_rib127i/crib127u1rib127u7132i
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