AT5G24318

http://metadb.riken.jp/db/SciNetS_rib102i/crib102u0rib102u50000024318i

AT5G24318

TAIR10 Locus

status_type

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u5i

description

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u13i

• O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G55430.1); Has 2814 Blast hits to 2741 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 2803; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).

label

http://www.w3.org/2000/01/rdf-schema#label

• AT5G24318

attributionURL

http://creativecommons.org/ns#attributionURL

• http://arabidopsis.org/servlets/TairObject?type=locus&name=AT5G24318

locus region

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u3i

• Chr5:8281976-8284001 -
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u2rib102u33210i

gene type

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u17i

• protein_coding
  http://metadb.riken.jp/db/SciNetS_ria253i/cria253u10i

species

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u18i

• Arabidopsis thaliana
  http://metadb.riken.jp/db/SciNetS_rib166i/crib166u26rib166u3702i

seeAlso

http://www.w3.org/2000/01/rdf-schema#seeAlso

• http://database.riken.jp/sw/item/crib102u0rib102u50000024318i

synonym

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u14i

relationship

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u6i

TAIR10 Gene Model

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u2i

• AT5G24318.2
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u50000243182i
• AT5G24318.1
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u50000243181i

TAIR_gene_model (on ARTADE2DB) (ver. TAIR9)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• AT5G24318.1
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u522431801000i
• AT5G24318.2
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u522431802000i

TAIR によるGO注釈

http://metadb.riken.jp/db/SciNetS_ria269i/pria269u1i

• AT5G24318:involved in:carbohydrate metabolic process
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u154570i
• AT5G24318:has:cation binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u154571i
• AT5G24318:has:hydrolase activity, hydrolyzing O-glycosyl compounds
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u154568i
• AT5G24318:located in:extracellular region
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u154572i
• AT5G24318:has:catalytic activity
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u154569i

A.thaliana cDNA

http://metadb.riken.jp/db/SciNetS_ria277i/pria277u2i

• NM_001125799
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u25411i
• NM_001036859
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u23028i

Ds Mapping Information to TAIR10

http://metadb.riken.jp/db/SciNetS_ria278i/pria278u13i

• 52-0095-1_H-edge.1
  http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u19250i

AT_TAIR_gene

http://metadb.riken.jp/db/SciNetS_rib101i/prib101s4i

• AT5G24318.1
  http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u50000243181i
• AT5G24318.2
  http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u50000243182i

RIKEN A.thaliana gene family

http://metadb.riken.jp/db/SciNetS_rib123i/prib123s1i

• Cluster39
  http://metadb.riken.jp/db/SciNetS_rib123i/crib123s1rib123u39i

Domain Annotation(A.thaliana)

http://metadb.riken.jp/db/SciNetS_rib126i/prib126u1i

• Glyco_hydro_17
  http://metadb.riken.jp/db/SciNetS_rib126i/crib126u1rib126u413i
• X8
  http://metadb.riken.jp/db/SciNetS_rib126i/crib126u1rib126u279i

RIKEN Ortholog(A.thaliana and Rice)

http://metadb.riken.jp/db/SciNetS_rib127i/prib127u1i

• At-Os_Ortholog5713
  http://metadb.riken.jp/db/SciNetS_rib127i/crib127u1rib127u5713i