A.thaliana locus TAIR10 Locus

AT5G49180
http://metadb.riken.jp/db/SciNetS_rib102i/crib102u0rib102u50000049180i

AT5G49180(TAIR10 Locus)

URI表示モード

AT5G49180

TAIR10 Locus

status_type http://metadb.riken.jp/db/SciNetS_rib102i/prib102u5i

description http://metadb.riken.jp/db/SciNetS_rib99i/prib99u13i

Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, developing seed stage, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G06830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

label http://www.w3.org/2000/01/rdf-schema#label

AT5G49180

attributionURL http://creativecommons.org/ns#attributionURL

http://arabidopsis.org/servlets/TairObject?type=locus&name=AT5G49180

locus region http://metadb.riken.jp/db/SciNetS_rib102i/prib102u3i

Chr5:19940678-19943007 -
http://metadb.riken.jp/db/SciNetS_rib102i/crib102u2rib102u15248i

gene type http://metadb.riken.jp/db/SciNetS_rib99i/prib99u17i

protein_coding
http://metadb.riken.jp/db/SciNetS_ria253i/cria253u10i

species http://metadb.riken.jp/db/SciNetS_rib99i/prib99u18i

Arabidopsis thaliana
http://metadb.riken.jp/db/SciNetS_rib166i/crib166u26rib166u3702i

seeAlso http://www.w3.org/2000/01/rdf-schema#seeAlso

http://database.riken.jp/sw/item/crib102u0rib102u50000049180i

synonym http://metadb.riken.jp/db/SciNetS_rib99i/prib99u14i

relationship http://metadb.riken.jp/db/SciNetS_rib102i/prib102u6i

TAIR10 Gene Model http://metadb.riken.jp/db/SciNetS_rib102i/prib102u2i

AT5G49180.1
http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u50000491801i

RAFL cDNA http://metadb.riken.jp/db/SciNetS_ria11i/pria11s1i

RAFL09-21-I11
http://metadb.riken.jp/db/SciNetS_ria11i/cria11s1ria11u7754i

Swiss-Prot Plants http://metadb.riken.jp/db/SciNetS_ria214i/pria214u4i

PME58_ARATH
http://metadb.riken.jp/db/SciNetS_ria214i/cria214s6ria214u2691519021i

ARTADE2_Gene (Ver.20100511) http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

OMAT5P112520
http://metadb.riken.jp/db/SciNetS_ria227i/cria227s1ria227u501125200000i

TAIR_gene_model (on ARTADE2DB) (ver. TAIR9) http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

AT5G49180.1
http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u524918001000i

Genes with tiling-array support (Annotated) http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

AT5G49180.1
http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u524918001000i

TAIR によるGO注釈 http://metadb.riken.jp/db/SciNetS_ria269i/pria269u1i

TAIRによるPO注釈（生育ステージ） http://metadb.riken.jp/db/SciNetS_ria270i/pria270u1i

TAIRによるPO注釈（器官名） http://metadb.riken.jp/db/SciNetS_ria273i/pria273u1i

A.thaliana cDNA http://metadb.riken.jp/db/SciNetS_ria277i/pria277u2i

AT_TAIR_gene http://metadb.riken.jp/db/SciNetS_rib101i/prib101s4i

AT5G49180.1
http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u50000491801i

RIKEN A.thaliana gene family http://metadb.riken.jp/db/SciNetS_rib123i/prib123s1i

Cluster55
http://metadb.riken.jp/db/SciNetS_rib123i/crib123s1rib123u55i

Domain Annotation(A.thaliana) http://metadb.riken.jp/db/SciNetS_rib126i/prib126u1i

RIKEN Ortholog(A.thaliana and Rice) http://metadb.riken.jp/db/SciNetS_rib127i/prib127u1i

At-Os_Ortholog8341
http://metadb.riken.jp/db/SciNetS_rib127i/crib127u1rib127u8341i