AT5G64840

http://metadb.riken.jp/db/SciNetS_rib102i/crib102u0rib102u50000064840i

AT5G64840

TAIR10 Locus

status_type

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u5i

description

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u13i

• general control non-repressible 5 (GCN5); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT5G09930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

label

http://www.w3.org/2000/01/rdf-schema#label

• AT5G64840

attributionURL

http://creativecommons.org/ns#attributionURL

• http://arabidopsis.org/servlets/TairObject?type=locus&name=AT5G64840

locus region

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u3i

• Chr5:25916723-25919810 -
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u2rib102u706i

gene type

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u17i

• protein_coding
  http://metadb.riken.jp/db/SciNetS_ria253i/cria253u10i

species

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u18i

• Arabidopsis thaliana
  http://metadb.riken.jp/db/SciNetS_rib166i/crib166u26rib166u3702i

seeAlso

http://www.w3.org/2000/01/rdf-schema#seeAlso

• http://database.riken.jp/sw/item/crib102u0rib102u50000064840i

synonym

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u14i

• ATP-binding cassette F5
• GCN5
• ABCF5
• ATGCN5
• general control non-repressible 5

relationship

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u6i

TAIR10 Gene Model

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u2i

• AT5G64840.1
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u50000648401i

RAFL cDNA

http://metadb.riken.jp/db/SciNetS_ria11i/pria11s1i

• RAFL09-33-D21
  http://metadb.riken.jp/db/SciNetS_ria11i/cria11s1ria11u8431i

Swiss-Prot Plants

http://metadb.riken.jp/db/SciNetS_ria214i/pria214u4i

• AB5F_ARATH
  http://metadb.riken.jp/db/SciNetS_ria214i/cria214s6ria214u2692131093i

TAIR_gene_model (on ARTADE2DB) (ver. TAIR9)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• AT5G64840.1
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u526484001000i

Genes with tiling-array support (Annotated)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• AT5G64840.1
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u526484001000i

ARTADE2_Gene (Ver.20100511)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• OMAT5P117720
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s1ria227u501177200000i

TAIR によるGO注釈

http://metadb.riken.jp/db/SciNetS_ria269i/pria269u1i

• AT5G64840:has:nucleoside-triphosphatase activity
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u177896i
• AT5G64840:has:ATPase activity
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u177893i
• AT5G64840:has:transporter activity
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u177899i
• AT5G64840:has:ATP binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u177895i
• AT5G64840:involved in:response to nematode
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u177897i
• AT5G64840:has:nucleotide binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u177898i
• AT5G64840:located in:plasma membrane
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u177894i

TAIRによるPO注釈（生育ステージ）

http://metadb.riken.jp/db/SciNetS_ria270i/pria270u1i

• AT5G64840:expressed during:LP.06 six leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u143333i
• AT5G64840:expressed during:petal differentiation and expansion stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u159777i
• AT5G64840:expressed during:LP.08 eight leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u92210i
• AT5G64840:expressed during:LP.02 two leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u104511i
• AT5G64840:expressed during:C globular stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u54130i
• AT5G64840:expressed during:LP.12 twelve leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u80051i
• AT5G64840:expressed during:E expanded cotyledon stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u27081i
• AT5G64840:expressed during:4 leaf senescence stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u13245i
• AT5G64840:expressed during:LP.04 four leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u130779i
• AT5G64840:expressed during:F mature embryo stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u40413i
• AT5G64840:expressed during:D bilateral stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u67869i
• AT5G64840:expressed during:LP.10 ten leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u117126i
• AT5G64840:expressed during:4 anthesis
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u175997i

TAIRによるPO注釈（器官名）

http://metadb.riken.jp/db/SciNetS_ria273i/pria273u1i

• AT5G64840:expressed in:hypocotyl
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u266383i
• AT5G64840:expressed in:stamen
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u140269i
• AT5G64840:expressed in:seed
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u112333i
• AT5G64840:expressed in:stem
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u214090i
• AT5G64840:expressed in:inflorescence meristem
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u43970i
• AT5G64840:expressed in:collective leaf structure
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u294987i
• AT5G64840:expressed in:shoot system
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u83688i
• AT5G64840:expressed in:leaf lamina base
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u56603i
• AT5G64840:expressed in:leaf apex
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u279259i
• AT5G64840:expressed in:cauline leaf
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u16679i
• AT5G64840:expressed in:shoot apex
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u30969i
• AT5G64840:expressed in:root
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u70943i
• AT5G64840:expressed in:cotyledon
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u239865i
• AT5G64840:expressed in:pedicel
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u227684i
• AT5G64840:expressed in:embryo
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u98389i
• AT5G64840:expressed in:sepal
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u169567i
• AT5G64840:expressed in:vascular leaf
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u126368i
• AT5G64840:expressed in:petal
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u184201i
• AT5G64840:expressed in:carpel
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u154179i
• AT5G64840:expressed in:petiole
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u252298i
• AT5G64840:expressed in:flower
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u200343i

A.thaliana cDNA

http://metadb.riken.jp/db/SciNetS_ria277i/pria277u2i

• BT000510
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u12846i
• AK227200
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u4059i
• NM_125882
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u40840i
• RAFL09-33-D21
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u53533i

AT_TAIR_gene

http://metadb.riken.jp/db/SciNetS_rib101i/prib101s4i

• AT5G64840.1
  http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u50000648401i

RIKEN A.thaliana gene family

http://metadb.riken.jp/db/SciNetS_rib123i/prib123s1i

• Cluster16
  http://metadb.riken.jp/db/SciNetS_rib123i/crib123s1rib123u16i

Domain Annotation(A.thaliana)

http://metadb.riken.jp/db/SciNetS_rib126i/prib126u1i

• ABC_tran
  http://metadb.riken.jp/db/SciNetS_rib126i/crib126u1rib126u198i

RIKEN Ortholog(A.thaliana and Rice)

http://metadb.riken.jp/db/SciNetS_rib127i/prib127u1i

• At-Os_Ortholog4021
  http://metadb.riken.jp/db/SciNetS_rib127i/crib127u1rib127u4021i