AT1G12610

http://metadb.riken.jp/db/SciNetS_rib102i/crib102u0rib102u10000012610i

AT1G12610

TAIR10 Locus

status_type

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u5i

description

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u13i

• DWARF AND DELAYED FLOWERING 1 (DDF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G63030.2); Has 5207 Blast hits to 5205 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5202; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).

label

http://www.w3.org/2000/01/rdf-schema#label

• AT1G12610

attributionURL

http://creativecommons.org/ns#attributionURL

• http://arabidopsis.org/servlets/TairObject?type=locus&name=AT1G12610

locus region

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u3i

• Chr1:4289944-4291017 -
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u2rib102u27201i

gene type

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u17i

• protein_coding
  http://metadb.riken.jp/db/SciNetS_ria253i/cria253u10i

species

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u18i

• Arabidopsis thaliana
  http://metadb.riken.jp/db/SciNetS_rib166i/crib166u26rib166u3702i

seeAlso

http://www.w3.org/2000/01/rdf-schema#seeAlso

• http://database.riken.jp/sw/item/crib102u0rib102u10000012610i

synonym

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u14i

• DWARF AND DELAYED FLOWERING 1
• DDF1

relationship

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u6i

TAIR10 Gene Model

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u2i

• AT1G12610.1
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u10000126101i

RARGE Transposon Mutant

http://metadb.riken.jp/db/SciNetS_ria10i/pria10s1i

• 11-6083-1
  http://metadb.riken.jp/db/SciNetS_ria10i/cria10s1ria10u1160831i
• 13-3846-1
  http://metadb.riken.jp/db/SciNetS_ria10i/cria10s1ria10u1338461i

Swiss-Prot Plants

http://metadb.riken.jp/db/SciNetS_ria214i/pria214u4i

• DRE1F_ARATH
  http://metadb.riken.jp/db/SciNetS_ria214i/cria214s6ria214u2692123086i

TAIR_gene_model (on ARTADE2DB) (ver. TAIR9)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• AT1G12610.1
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u121261001000i

Genes with tiling-array support (Annotated)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• AT1G12610.1
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u121261001000i

ARTADE2_Gene (Ver.20100511)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• OMAT1P104030
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s1ria227u101040300000i

TAIR によるGO注釈

http://metadb.riken.jp/db/SciNetS_ria269i/pria269u1i

• AT1G12610:functions in:sequence-specific DNA binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u8918i
• AT1G12610:has:sequence-specific DNA binding transcription factor activity
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u8914i
• AT1G12610:involved in:response to water deprivation
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u8908i
• AT1G12610:functions in:DNA binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u8909i
• AT1G12610:located in:nucleus
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u8917i
• AT1G12610:involved in:cell growth
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u8913i
• AT1G12610:involved in:response to freezing
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u8911i
• AT1G12610:involved in:regulation of transcription, DNA-dependent
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u8907i
• AT1G12610:expressed during:response to salt stress
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u8912i
• AT1G12610:involved in:regulation of timing of transition from vegetative to reproductive phase
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u8919i
• AT1G12610:has:DNA binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u8915i
• AT1G12610:involved in:response to heat
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u8906i
• AT1G12610:involved in:regulation of gibberellin biosynthetic process
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u8916i
• AT1G12610:involved in:response to salt stress
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u8910i

TAIRによるPO注釈（生育ステージ）

http://metadb.riken.jp/db/SciNetS_ria270i/pria270u1i

• AT1G12610:expressed during:petal differentiation and expansion stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u144421i
• AT1G12610:expressed during:4 anthesis
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u160908i
• AT1G12610:expressed during:LP.08 eight leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u80898i
• AT1G12610:expressed during:LP.10 ten leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u105386i

TAIRによるPO注釈（器官名）

http://metadb.riken.jp/db/SciNetS_ria273i/pria273u1i

• AT1G12610:expressed in:shoot apex
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u17655i
• AT1G12610:expressed in:stamen
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u127332i
• AT1G12610:expressed in:carpel
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u141250i
• AT1G12610:expressed in:vascular leaf
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u113319i
• AT1G12610:expressed in:leaf apex
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u267319i
• AT1G12610:expressed in:hypocotyl
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u253246i
• AT1G12610:expressed in:cotyledon
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u228563i
• AT1G12610:expressed in:root
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u57558i
• AT1G12610:expressed in:stem
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u2093i
• AT1G12610:expressed in:pedicel
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u215065i
• AT1G12610:expressed in:flower
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u185295i

A.thaliana cDNA

http://metadb.riken.jp/db/SciNetS_ria277i/pria277u2i

• AK228194
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u4705i
• NM_101131
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u26760i
• AY560892
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u11590i

Ds Mapping Information to TAIR10

http://metadb.riken.jp/db/SciNetS_ria278i/pria278u13i

• 13-3846-1_H-edge.1
  http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u10994i
• 11-6083-1_H-edge.1
  http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u4259i

RIKEN Arabidopsis Transcription Factor database

http://metadb.riken.jp/db/SciNetS_ria5i/pria5s1i

• At1g12610
  http://metadb.riken.jp/db/SciNetS_ria5i/cria5u1ria5u112610i

AT_TAIR_gene

http://metadb.riken.jp/db/SciNetS_rib101i/prib101s4i

• AT1G12610.1
  http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u10000126101i

RIKEN A.thaliana gene family

http://metadb.riken.jp/db/SciNetS_rib123i/prib123s1i

• Cluster13
  http://metadb.riken.jp/db/SciNetS_rib123i/crib123s1rib123u13i

RIKEN A.thaliana gene family (tandem)

http://metadb.riken.jp/db/SciNetS_rib123i/prib123s1i

• tandem cluster11
  http://metadb.riken.jp/db/SciNetS_rib123i/crib123s2rib123u11i

Domain Annotation(A.thaliana)

http://metadb.riken.jp/db/SciNetS_rib126i/prib126u1i

• AP2
  http://metadb.riken.jp/db/SciNetS_rib126i/crib126u1rib126u89i

RIKEN Ortholog(A.thaliana and Rice)

http://metadb.riken.jp/db/SciNetS_rib127i/prib127u1i

• At-Os_Ortholog10882
  http://metadb.riken.jp/db/SciNetS_rib127i/crib127u1rib127u10882i

RIKEN Ds transposon line

http://metadb.riken.jp/db/SciNetS_rib32i/prib32s1i

• 11-6083-1
  http://metadb.riken.jp/db/SciNetS_rib32i/crib32s19rib32s1288i