AT1G15520

http://metadb.riken.jp/db/SciNetS_rib102i/crib102u0rib102u10000015520i

AT1G15520

TAIR10 Locus

status_type

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u5i

description

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u13i

• pleiotropic drug resistance 12 (PDR12); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615; Bacteria - 304057; Metazoa - 8776; Fungi - 6428; Plants - 5794; Viruses - 2; Other Eukaryotes - 45311 (source: NCBI BLink).

label

http://www.w3.org/2000/01/rdf-schema#label

• AT1G15520

attributionURL

http://creativecommons.org/ns#attributionURL

• http://arabidopsis.org/servlets/TairObject?type=locus&name=AT1G15520

locus region

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u3i

• Chr1:5331858-5338326 -
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u2rib102u6605i

gene type

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u17i

• protein_coding
  http://metadb.riken.jp/db/SciNetS_ria253i/cria253u10i

species

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u18i

• Arabidopsis thaliana
  http://metadb.riken.jp/db/SciNetS_rib166i/crib166u26rib166u3702i

seeAlso

http://www.w3.org/2000/01/rdf-schema#seeAlso

• http://database.riken.jp/sw/item/crib102u0rib102u10000015520i

synonym

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u14i

• PLEIOTROPIC DRUG RESISTANCE 12
• pleiotropic drug resistance 12
• PDR12
• Arabidopsis thaliana ATP-binding cassette G40
• ATPDR12
• ATABCG40
• ATP-binding cassette G40
• ABCG40

relationship

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u6i

TAIR10 Gene Model

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u2i

• AT1G15520.1
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u10000155201i

RARGE Transposon Mutant

http://metadb.riken.jp/db/SciNetS_ria10i/pria10s1i

• 13-5771-1
  http://metadb.riken.jp/db/SciNetS_ria10i/cria10s1ria10u1357711i

Swiss-Prot Plants

http://metadb.riken.jp/db/SciNetS_ria214i/pria214u4i

• AB40G_ARATH
  http://metadb.riken.jp/db/SciNetS_ria214i/cria214s6ria214u2692209141i

TAIR_gene_model (on ARTADE2DB) (ver. TAIR9)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• AT1G15520.1
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u121552001000i

TAIR によるGO注釈

http://metadb.riken.jp/db/SciNetS_ria269i/pria269u1i

• AT1G15520:has:nucleotide binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10947i
• AT1G15520:involved in:response to ethylene stimulus
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10946i
• AT1G15520:has:nucleoside-triphosphatase activity
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10961i
• AT1G15520:located in:plasma membrane
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10960i
• AT1G15520:involved in:defense response to fungus
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10937i
• AT1G15520:involved in:salicylic acid biosynthetic process
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10958i
• AT1G15520:involved in:regulation of plant-type hypersensitive response
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10957i
• AT1G15520:involved in:signal transduction
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10936i
• AT1G15520:involved in:systemic acquired resistance, salicylic acid mediated signaling pathway
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10935i
• AT1G15520:has:ATPase activity, coupled to transmembrane movement of substances
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10952i
• AT1G15520:involved in:negative regulation of programmed cell death
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10951i
• AT1G15520:involved in:response to auxin stimulus
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10941i
• AT1G15520:involved in:response to salicylic acid stimulus
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10945i
• AT1G15520:involved in:response to jasmonic acid stimulus
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10949i
• AT1G15520:involved in:detection of biotic stimulus
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10939i
• AT1G15520:involved in:negative regulation of defense response
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10967i
• AT1G15520:involved in:MAPKKK cascade
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10944i
• AT1G15520:has:ATP binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10948i
• AT1G15520:involved in:response to biotic stimulus
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10963i
• AT1G15520:involved in:drug transmembrane transport
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10966i
• AT1G15520:involved in:regulation of hydrogen peroxide metabolic process
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10962i
• AT1G15520:involved in:regulation of multi-organism process
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10954i
• AT1G15520:involved in:response to water deprivation
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10940i
• AT1G15520:involved in:regulation of response to biotic stimulus
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10953i
• AT1G15520:involved in:response to abscisic acid stimulus
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10956i
• AT1G15520:involved in:defense response to bacterium
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10955i
• AT1G15520:involved in:terpenoid transport
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10959i
• AT1G15520:involved in:jasmonic acid mediated signaling pathway
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10934i
• AT1G15520:involved in:lead ion transport
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10943i
• AT1G15520:involved in:hyperosmotic salinity response
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10965i
• AT1G15520:has:ATPase activity
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10950i
• AT1G15520:involved in:abscisic acid transport
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10942i
• AT1G15520:involved in:response to ozone
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10969i
• AT1G15520:involved in:abscisic acid mediated signaling pathway
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10964i
• AT1G15520:involved in:protein targeting to membrane
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10968i
• AT1G15520:involved in:response to chitin
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u10938i

TAIRによるPO注釈（生育ステージ）

http://metadb.riken.jp/db/SciNetS_ria270i/pria270u1i

• AT1G15520:expressed during:4 anthesis
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u161099i
• AT1G15520:expressed during:LP.08 eight leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u81040i
• AT1G15520:expressed during:LP.12 twelve leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u68912i
• AT1G15520:expressed during:LP.04 four leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u118214i
• AT1G15520:expressed during:LP.02 two leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u93212i
• AT1G15520:expressed during:LP.06 six leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u131811i
• AT1G15520:expressed during:petal differentiation and expansion stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u144621i
• AT1G15520:expressed during:4 leaf senescence stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u1443i

TAIRによるPO注釈（器官名）

http://metadb.riken.jp/db/SciNetS_ria273i/pria273u1i

• AT1G15520:expressed in:vascular leaf
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u113487i
• AT1G15520:expressed in:sepal
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u155427i
• AT1G15520:expressed in:stem
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u201508i
• AT1G15520:expressed in:guard cell
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u310413i
• AT1G15520:expressed in:root
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u310414i
• AT1G15520:expressed in:flower
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u295401i
• AT1G15520:expressed in:collective leaf structure
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u280505i
• AT1G15520:expressed in:stamen
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u127492i
• AT1G15520:expressed in:leaf lamina base
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u45011i
• AT1G15520:expressed in:petal
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u170784i
• AT1G15520:expressed in:cauline leaf
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u4891i
• AT1G15520:expressed in:hypocotyl
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u253417i
• AT1G15520:expressed in:carpel
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u141414i

A.thaliana cDNA

http://metadb.riken.jp/db/SciNetS_ria277i/pria277u2i

• NM_101421
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u27036i

Ds Mapping Information to TAIR10

http://metadb.riken.jp/db/SciNetS_ria278i/pria278u13i

• 53-3970-1_G-edge.1
  http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u24617i
• 13-5771-1_H-edge.1
  http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u12430i
• 13-6009-1_G-edge.1
  http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u12604i
• 53-4452-1_H-edge.1
  http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u25369i
• 53-3970-1_H-edge.1
  http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u24618i
• 13-6009-1_H-edge.1
  http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u12605i
• 13-5771-1_G-edge.1
  http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u12429i
• 54-4257-2_G-edge.1
  http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u28742i
• 15-0252-1_H-edge.1
  http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u12978i
• 54-4257-2_H-edge.1
  http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u28743i
• 16-0395-1_G-edge.1
  http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u16997i
• 53-4452-1_G-edge.1
  http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u25368i

AT_TAIR_gene

http://metadb.riken.jp/db/SciNetS_rib101i/prib101s4i

• AT1G15520.1
  http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u10000155201i

RIKEN A.thaliana gene family

http://metadb.riken.jp/db/SciNetS_rib123i/prib123s1i

• Cluster86
  http://metadb.riken.jp/db/SciNetS_rib123i/crib123s1rib123u86i

Domain Annotation(A.thaliana)

http://metadb.riken.jp/db/SciNetS_rib126i/prib126u1i

• ABC2_membrane
  http://metadb.riken.jp/db/SciNetS_rib126i/crib126u1rib126u197i
• ABC_tran
  http://metadb.riken.jp/db/SciNetS_rib126i/crib126u1rib126u198i
• PDR_assoc
  http://metadb.riken.jp/db/SciNetS_rib126i/crib126u1rib126u596i

RIKEN Ortholog(A.thaliana and Rice)

http://metadb.riken.jp/db/SciNetS_rib127i/prib127u1i

• At-Os_Ortholog581
  http://metadb.riken.jp/db/SciNetS_rib127i/crib127u1rib127u581i

RIKEN Ds transposon line

http://metadb.riken.jp/db/SciNetS_rib32i/prib32s1i

• 13-6009-1
  http://metadb.riken.jp/db/SciNetS_rib32i/crib32s19rib32s854i
• 15-0252-1
  http://metadb.riken.jp/db/SciNetS_rib32i/crib32s19rib32s855i