AT2G24840

http://metadb.riken.jp/db/SciNetS_rib102i/crib102u0rib102u20000024840i

AT2G24840

TAIR10 Locus

status_type

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u5i

description

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u13i

• AGAMOUS-like 61 (AGL61); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 62 (TAIR:AT5G60440.1); Has 5781 Blast hits to 5781 proteins in 683 species: Archae - 0; Bacteria - 0; Metazoa - 624; Fungi - 302; Plants - 4788; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).

label

http://www.w3.org/2000/01/rdf-schema#label

• AT2G24840

attributionURL

http://creativecommons.org/ns#attributionURL

• http://arabidopsis.org/servlets/TairObject?type=locus&name=AT2G24840

locus region

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u3i

• Chr2:10581082-10582015 +
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u2rib102u3544i

gene type

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u17i

• protein_coding
  http://metadb.riken.jp/db/SciNetS_ria253i/cria253u10i

species

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u18i

• Arabidopsis thaliana
  http://metadb.riken.jp/db/SciNetS_rib166i/crib166u26rib166u3702i

seeAlso

http://www.w3.org/2000/01/rdf-schema#seeAlso

• http://database.riken.jp/sw/item/crib102u0rib102u20000024840i

synonym

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u14i

• AGL61
• DIA
• DIANA
• AGAMOUS-like 61

relationship

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u6i

TAIR10 Gene Model

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u2i

• AT2G24840.1
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u20000248401i

RARGE Transposon Mutant

http://metadb.riken.jp/db/SciNetS_ria10i/pria10s1i

• 11-2605-1
  http://metadb.riken.jp/db/SciNetS_ria10i/cria10s1ria10u1126051i

シロイヌナズナ変異株観察情報

http://metadb.riken.jp/db/SciNetS_ria143i/pria143u5i

• Z023916_obs_1 (Activation tagging line)
  http://metadb.riken.jp/db/SciNetS_ria143i/cria143u1ria143u1321i
• Z023916_obs_5 (Activation tagging line)
  http://metadb.riken.jp/db/SciNetS_ria143i/cria143u1ria143u1588i

Swiss-Prot Plants

http://metadb.riken.jp/db/SciNetS_ria214i/pria214u4i

• AGL61_ARATH
  http://metadb.riken.jp/db/SciNetS_ria214i/cria214s6ria214u2642528304i

TAIR_gene_model (on ARTADE2DB) (ver. TAIR9)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• AT2G24840.1
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u222484001000i

TAIR によるGO注釈

http://metadb.riken.jp/db/SciNetS_ria269i/pria269u1i

• AT2G24840:functions in:DNA binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u57608i
• AT2G24840:has:protein dimerization activity
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u57607i
• AT2G24840:involved in:embryo sac central cell differentiation
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u57609i
• AT2G24840:involved in:response to mechanical stimulus
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u57611i
• AT2G24840:has:DNA binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u57613i
• AT2G24840:has:sequence-specific DNA binding transcription factor activity
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u57610i
• AT2G24840:has:protein binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u57605i
• AT2G24840:involved in:calcium-mediated signaling
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u57612i
• AT2G24840:located in:polar nucleus
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u57614i
• AT2G24840:located in:nucleus
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u57606i

TAIRによるPO注釈（器官名）

http://metadb.riken.jp/db/SciNetS_ria273i/pria273u1i

• AT2G24840:located in:endosperm
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u300481i
• AT2G24840:located in:central cell
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u300482i

A.thaliana cDNA

http://metadb.riken.jp/db/SciNetS_ria277i/pria277u2i

• EU836691
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u21893i
• DQ056542
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u20706i
• NM_179727
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u45775i

Ds Mapping Information to TAIR10

http://metadb.riken.jp/db/SciNetS_ria278i/pria278u13i

• 11-2605-1_G-edge.1
  http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u1863i

タグ

http://database.riken.jp/sw/act_tag.owl#locus

• Z023916_tag_3
  http://metadb.riken.jp/db/SciNetS_ria37i/cria37u2ria37u236i

RIKEN Arabidopsis Transcription Factor database

http://metadb.riken.jp/db/SciNetS_ria5i/pria5s1i

• At2g24840
  http://metadb.riken.jp/db/SciNetS_ria5i/cria5u1ria5u224840i

AT_TAIR_gene

http://metadb.riken.jp/db/SciNetS_rib101i/prib101s4i

• AT2G24840.1
  http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u20000248401i

RIKEN A.thaliana gene family

http://metadb.riken.jp/db/SciNetS_rib123i/prib123s1i

• Cluster44
  http://metadb.riken.jp/db/SciNetS_rib123i/crib123s1rib123u44i

RIKEN Ortholog(A.thaliana and Rice)

http://metadb.riken.jp/db/SciNetS_rib127i/prib127u1i

• At-Os_Ortholog2254
  http://metadb.riken.jp/db/SciNetS_rib127i/crib127u1rib127u2254i