AT3G12830

http://metadb.riken.jp/db/SciNetS_rib102i/crib102u0rib102u30000012830i

AT3G12830

TAIR10 Locus

status_type

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u5i

description

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u13i

• SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G56150.1); Has 1206 Blast hits to 1201 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1205; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

label

http://www.w3.org/2000/01/rdf-schema#label

• AT3G12830

attributionURL

http://creativecommons.org/ns#attributionURL

• http://arabidopsis.org/servlets/TairObject?type=locus&name=AT3G12830

locus region

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u3i

• Chr3:4078651-4079608 -
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u2rib102u18913i

gene type

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u17i

• protein_coding
  http://metadb.riken.jp/db/SciNetS_ria253i/cria253u10i

species

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u18i

• Arabidopsis thaliana
  http://metadb.riken.jp/db/SciNetS_rib166i/crib166u26rib166u3702i

seeAlso

http://www.w3.org/2000/01/rdf-schema#seeAlso

• http://database.riken.jp/sw/item/crib102u0rib102u30000012830i

synonym

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u14i

relationship

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u6i

TAIR10 Gene Model

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u2i

• AT3G12830.1
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u30000128301i

RAFL cDNA

http://metadb.riken.jp/db/SciNetS_ria11i/pria11s1i

• RAFL16-28-L20
  http://metadb.riken.jp/db/SciNetS_ria11i/cria11s1ria11u13992i

ARTADE2_Gene (Ver.20100511)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• OMAT3P104220
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s1ria227u301042200000i

TAIR_gene_model (on ARTADE2DB) (ver. TAIR9)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• AT3G12830.1
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u321283001000i

Genes with tiling-array support (Annotated)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• AT3G12830.1
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u321283001000i

TAIR によるGO注釈

http://metadb.riken.jp/db/SciNetS_ria269i/pria269u1i

• AT3G12830:involved in:response to auxin stimulus
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u83567i
• AT3G12830:has:molecular_function
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u83566i

TAIRによるPO注釈（生育ステージ）

http://metadb.riken.jp/db/SciNetS_ria270i/pria270u1i

• AT3G12830:expressed during:F mature embryo stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u33546i
• AT3G12830:expressed during:LP.08 eight leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u85925i
• AT3G12830:expressed during:4 anthesis
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u167636i
• AT3G12830:expressed during:LP.12 twelve leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u73782i
• AT3G12830:expressed during:LP.06 six leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u136858i
• AT3G12830:expressed during:4 leaf senescence stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u6588i
• AT3G12830:expressed during:D bilateral stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u60759i
• AT3G12830:expressed during:LP.04 four leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u123713i
• AT3G12830:expressed during:LP.02 two leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u98151i
• AT3G12830:expressed during:E expanded cotyledon stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u19919i
• AT3G12830:expressed during:C globular stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u47009i
• AT3G12830:expressed during:LP.10 ten leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u110606i
• AT3G12830:expressed during:petal differentiation and expansion stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u151255i

TAIRによるPO注釈（器官名）

http://metadb.riken.jp/db/SciNetS_ria273i/pria273u1i

• AT3G12830:expressed in:shoot apex
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u23555i
• AT3G12830:expressed in:carpel
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u147034i
• AT3G12830:expressed in:root
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u63496i
• AT3G12830:expressed in:stem
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u207016i
• AT3G12830:expressed in:pedicel
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u220657i
• AT3G12830:expressed in:hypocotyl
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u259102i
• AT3G12830:expressed in:flower
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u191968i
• AT3G12830:expressed in:sepal
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u161614i
• AT3G12830:expressed in:seed
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u105131i
• AT3G12830:expressed in:leaf apex
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u272617i
• AT3G12830:expressed in:vascular leaf
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u119116i
• AT3G12830:expressed in:embryo
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u90727i
• AT3G12830:expressed in:collective leaf structure
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u286834i
• AT3G12830:expressed in:inflorescence meristem
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u37302i
• AT3G12830:expressed in:petiole
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u245879i
• AT3G12830:expressed in:stamen
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u133102i
• AT3G12830:expressed in:cotyledon
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u233590i
• AT3G12830:expressed in:cauline leaf
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u10038i
• AT3G12830:expressed in:petal
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u176650i

A.thaliana cDNA

http://metadb.riken.jp/db/SciNetS_ria277i/pria277u2i

• BT012257
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u63803i
• NM_112119
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u66936i
• AK228982
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u61026i
• BT011607
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u63732i

AT_TAIR_gene

http://metadb.riken.jp/db/SciNetS_rib101i/prib101s4i

• AT3G12830.1
  http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u30000128301i

RIKEN A.thaliana gene family

http://metadb.riken.jp/db/SciNetS_rib123i/prib123s1i

• Cluster62
  http://metadb.riken.jp/db/SciNetS_rib123i/crib123s1rib123u62i

Domain Annotation(A.thaliana)

http://metadb.riken.jp/db/SciNetS_rib126i/prib126u1i

• Auxin_inducible
  http://metadb.riken.jp/db/SciNetS_rib126i/crib126u1rib126u331i

RIKEN Ortholog(A.thaliana and Rice)

http://metadb.riken.jp/db/SciNetS_rib127i/prib127u1i

• At-Os_Ortholog3815
  http://metadb.riken.jp/db/SciNetS_rib127i/crib127u1rib127u3815i