AT3G14230

http://metadb.riken.jp/db/SciNetS_rib102i/crib102u0rib102u30000014230i

AT3G14230

TAIR10 Locus

status_type

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u5i

description

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u13i

• related to AP2 2 (RAP2.2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2 12 (TAIR:AT1G53910.2); Has 6244 Blast hits to 5852 proteins in 259 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6195; Viruses - 4; Other Eukaryotes - 43 (source: NCBI BLink).

label

http://www.w3.org/2000/01/rdf-schema#label

• AT3G14230

attributionURL

http://creativecommons.org/ns#attributionURL

• http://arabidopsis.org/servlets/TairObject?type=locus&name=AT3G14230

locus region

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u3i

• Chr3:4737146-4739141 -
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u2rib102u8551i

gene type

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u17i

• protein_coding
  http://metadb.riken.jp/db/SciNetS_ria253i/cria253u10i

species

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u18i

• Arabidopsis thaliana
  http://metadb.riken.jp/db/SciNetS_rib166i/crib166u26rib166u3702i

seeAlso

http://www.w3.org/2000/01/rdf-schema#seeAlso

• http://database.riken.jp/sw/item/crib102u0rib102u30000014230i

synonym

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u14i

• related to AP2 2
• RAP2.2

relationship

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u6i

TAIR10 Gene Model

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u2i

• AT3G14230.2
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u30000142302i
• AT3G14230.1
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u30000142301i
• AT3G14230.3
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u30000142303i

RARGE Transposon Mutant

http://metadb.riken.jp/db/SciNetS_ria10i/pria10s1i

• 12-4585-1
  http://metadb.riken.jp/db/SciNetS_ria10i/cria10s1ria10u1245851i

RAFL cDNA

http://metadb.riken.jp/db/SciNetS_ria11i/pria11s1i

• RAFL11-05-O04
  http://metadb.riken.jp/db/SciNetS_ria11i/cria11s1ria11u11179i

Swiss-Prot Plants

http://metadb.riken.jp/db/SciNetS_ria214i/pria214u4i

• RAP22_ARATH
  http://metadb.riken.jp/db/SciNetS_ria214i/cria214s6ria214u2692130224i

TAIR_gene_model (on ARTADE2DB) (ver. TAIR9)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• AT3G14230.3
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u321423003000i
• AT3G14230.1
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u321423001000i
• AT3G14230.2
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u321423002000i

Genes with tiling-array support (Annotated)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• AT3G14230.3
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u321423003000i
• AT3G14230.1
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u321423001000i
• AT3G14230.2
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u321423002000i

ARTADE2_Gene (Ver.20100511)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• OMAT3P104760
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s1ria227u301047600000i

TAIR によるGO注釈

http://metadb.riken.jp/db/SciNetS_ria269i/pria269u1i

• AT3G14230:involved in:response to arsenic-containing substance
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u84790i
• AT3G14230:involved in:response to hypoxia
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u84785i
• AT3G14230:involved in:protein N-linked glycosylation
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u84789i
• AT3G14230:has:sequence-specific DNA binding transcription factor activity
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u84787i
• AT3G14230:involved in:regulation of gene expression
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u84792i
• AT3G14230:involved in:regulation of transcription, DNA-dependent
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u84786i
• AT3G14230:has:DNA binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u84791i
• AT3G14230:functions in:DNA binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u84788i
• AT3G14230:located in:nucleus
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u84784i

TAIRによるPO注釈（生育ステージ）

http://metadb.riken.jp/db/SciNetS_ria270i/pria270u1i

• AT3G14230:expressed during:F mature embryo stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u33645i
• AT3G14230:expressed during:LP.10 ten leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u110690i
• AT3G14230:expressed during:LP.02 two leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u98234i
• AT3G14230:expressed during:4 anthesis
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u167752i
• AT3G14230:expressed during:LP.06 six leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u136941i
• AT3G14230:expressed during:4 leaf senescence stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u6678i
• AT3G14230:expressed during:LP.08 eight leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u86002i
• AT3G14230:expressed during:LP.12 twelve leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u73860i
• AT3G14230:expressed during:D bilateral stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u60859i
• AT3G14230:expressed during:LP.04 four leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u123808i
• AT3G14230:expressed during:C globular stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u47110i
• AT3G14230:expressed during:petal differentiation and expansion stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u151375i
• AT3G14230:expressed during:E expanded cotyledon stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u20022i

TAIRによるPO注釈（器官名）

http://metadb.riken.jp/db/SciNetS_ria273i/pria273u1i

• AT3G14230:expressed in:leaf apex
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u272699i
• AT3G14230:expressed in:sepal
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u161725i
• AT3G14230:expressed in:inflorescence meristem
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u37389i
• AT3G14230:expressed in:flower
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u192089i
• AT3G14230:expressed in:shoot apex
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u23658i
• AT3G14230:expressed in:petal
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u176752i
• AT3G14230:expressed in:stem
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u207117i
• AT3G14230:expressed in:petiole
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u245964i
• AT3G14230:expressed in:hypocotyl
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u259201i
• AT3G14230:expressed in:seed
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u105234i
• AT3G14230:expressed in:pedicel
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u220760i
• AT3G14230:expressed in:stamen
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u133199i
• AT3G14230:expressed in:cauline leaf
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u10126i
• AT3G14230:expressed in:leaf lamina base
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u50148i
• AT3G14230:expressed in:embryo
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u90836i
• AT3G14230:expressed in:carpel
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u147131i
• AT3G14230:expressed in:collective leaf structure
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u286947i
• AT3G14230:expressed in:root
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u63602i
• AT3G14230:expressed in:shoot system
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u77189i
• AT3G14230:expressed in:cotyledon
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u233668i
• AT3G14230:expressed in:vascular leaf
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u119217i

A.thaliana cDNA

http://metadb.riken.jp/db/SciNetS_ria277i/pria277u2i

• RAFL11-05-O04
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u73118i
• BT000374
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u62725i
• NM_180252
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u70783i
• NM_180251
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u70782i
• NM_112281
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u67095i

Ds Mapping Information to TAIR10

http://metadb.riken.jp/db/SciNetS_ria278i/pria278u13i

• 12-4585-1_H-edge.1
  http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u7668i
• 12-4585-1_G-edge.1
  http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u7667i

RIKEN Arabidopsis Transcription Factor database

http://metadb.riken.jp/db/SciNetS_ria5i/pria5s1i

• At3g14230
  http://metadb.riken.jp/db/SciNetS_ria5i/cria5u1ria5u314230i

AT_TAIR_gene

http://metadb.riken.jp/db/SciNetS_rib101i/prib101s4i

• AT3G14230.1
  http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u30000142301i
• AT3G14230.2
  http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u30000142302i
• AT3G14230.3
  http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u30000142303i

RIKEN A.thaliana gene family

http://metadb.riken.jp/db/SciNetS_rib123i/prib123s1i

• Cluster13
  http://metadb.riken.jp/db/SciNetS_rib123i/crib123s1rib123u13i

Domain Annotation(A.thaliana)

http://metadb.riken.jp/db/SciNetS_rib126i/prib126u1i

• AP2
  http://metadb.riken.jp/db/SciNetS_rib126i/crib126u1rib126u89i

RIKEN Ortholog(A.thaliana and Rice)

http://metadb.riken.jp/db/SciNetS_rib127i/prib127u1i

• At-Os_Ortholog7989
  http://metadb.riken.jp/db/SciNetS_rib127i/crib127u1rib127u7989i

RIKEN Ds transposon line

http://metadb.riken.jp/db/SciNetS_rib32i/prib32s1i

• 12-4585-1
  http://metadb.riken.jp/db/SciNetS_rib32i/crib32s19rib32s2674i