AT3G25740

http://metadb.riken.jp/db/SciNetS_rib102i/crib102u0rib102u30000025740i

AT3G25740

TAIR10 Locus

status_type

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u5i

description

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u13i

• methionine aminopeptidase 1C (MAP1B); FUNCTIONS IN: metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, N-terminal protein amino acid modification; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24, structural domain (InterPro:IPR000994), Peptidase M24A, methionine aminopeptidase, subfamily 1 (InterPro:IPR002467), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: methionine aminopeptidase 1B (TAIR:AT1G13270.1); Has 17328 Blast hits to 17310 proteins in 2820 species: Archae - 492; Bacteria - 11957; Metazoa - 335; Fungi - 201; Plants - 233; Viruses - 0; Other Eukaryotes - 4110 (source: NCBI BLink).

label

http://www.w3.org/2000/01/rdf-schema#label

• AT3G25740

attributionURL

http://creativecommons.org/ns#attributionURL

• http://arabidopsis.org/servlets/TairObject?type=locus&name=AT3G25740

locus region

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u3i

• Chr3:9397786-9399762 +
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u2rib102u15970i

gene type

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u17i

• protein_coding
  http://metadb.riken.jp/db/SciNetS_ria253i/cria253u10i

species

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u18i

• Arabidopsis thaliana
  http://metadb.riken.jp/db/SciNetS_rib166i/crib166u26rib166u3702i

seeAlso

http://www.w3.org/2000/01/rdf-schema#seeAlso

• http://database.riken.jp/sw/item/crib102u0rib102u30000025740i

synonym

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u14i

• MAP1C
• methionine aminopeptidase 1C
• MAP1B
• METHIONINE AMINOPEPTIDASE 1C

relationship

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u6i

TAIR10 Gene Model

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u2i

• AT3G25740.1
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u30000257401i

Swiss-Prot Plants

http://metadb.riken.jp/db/SciNetS_ria214i/pria214u4i

• AMP1C_ARATH
  http://metadb.riken.jp/db/SciNetS_ria214i/cria214s6ria214u2691531051i

TAIR_gene_model (on ARTADE2DB) (ver. TAIR9)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• AT3G25740.1
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u322574001000i

TAIR によるGO注釈

http://metadb.riken.jp/db/SciNetS_ria269i/pria269u1i

• AT3G25740:involved in:N-terminal protein amino acid modification
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u92994i
• AT3G25740:located in:mitochondrion
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u92993i
• AT3G25740:has:metalloexopeptidase activity
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u92992i
• AT3G25740:has:aminopeptidase activity
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u92996i
• AT3G25740:located in:chloroplast
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u92991i
• AT3G25740:involved in:cellular process
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u92995i
• AT3G25740:involved in:proteolysis
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u92990i

TAIRによるPO注釈（生育ステージ）

http://metadb.riken.jp/db/SciNetS_ria270i/pria270u1i

• AT3G25740:expressed during:F mature embryo stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u34281i
• AT3G25740:expressed during:D bilateral stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u61519i
• AT3G25740:expressed during:E expanded cotyledon stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u20682i
• AT3G25740:expressed during:LP.08 eight leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u86581i
• AT3G25740:expressed during:LP.02 two leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u98814i
• AT3G25740:expressed during:LP.12 twelve leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u74433i
• AT3G25740:expressed during:4 anthesis
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u168521i
• AT3G25740:expressed during:petal differentiation and expansion stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u152158i
• AT3G25740:expressed during:C globular stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u47772i
• AT3G25740:expressed during:LP.06 six leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u137533i
• AT3G25740:expressed during:4 leaf senescence stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u7285i
• AT3G25740:expressed during:LP.10 ten leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u111285i
• AT3G25740:expressed during:LP.04 four leaves visible
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u124462i

TAIRによるPO注釈（器官名）

http://metadb.riken.jp/db/SciNetS_ria273i/pria273u1i

• AT3G25740:expressed in:leaf apex
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u273315i
• AT3G25740:expressed in:flower
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u192858i
• AT3G25740:expressed in:collective leaf structure
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u287690i
• AT3G25740:expressed in:shoot system
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u77795i
• AT3G25740:expressed in:root
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u64274i
• AT3G25740:expressed in:petiole
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u246558i
• AT3G25740:expressed in:seed
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u105897i
• AT3G25740:expressed in:leaf lamina base
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u50752i
• AT3G25740:expressed in:stem
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u207777i
• AT3G25740:expressed in:vascular leaf
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u119884i
• AT3G25740:expressed in:shoot apex
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u24352i
• AT3G25740:expressed in:hypocotyl
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u259867i
• AT3G25740:expressed in:carpel
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u147788i
• AT3G25740:expressed in:petal
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u177452i
• AT3G25740:expressed in:sepal
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u162459i
• AT3G25740:expressed in:cauline leaf
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u10742i
• AT3G25740:expressed in:fruit
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u313078i
• AT3G25740:expressed in:cotyledon
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u234235i
• AT3G25740:expressed in:inflorescence meristem
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u38008i
• AT3G25740:expressed in:embryo
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u91549i
• AT3G25740:expressed in:stamen
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u133869i
• AT3G25740:expressed in:pedicel
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u221396i

A.thaliana cDNA

http://metadb.riken.jp/db/SciNetS_ria277i/pria277u2i

• RAFL09-44-P18
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u72742i
• AF250962
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u60113i
• AK221544
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u60498i
• NM_113473
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u68207i
• BT024875
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u64235i

AT_TAIR_gene

http://metadb.riken.jp/db/SciNetS_rib101i/prib101s4i

• AT3G25740.1
  http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u30000257401i

RIKEN A.thaliana gene family

http://metadb.riken.jp/db/SciNetS_rib123i/prib123s1i

• Cluster698
  http://metadb.riken.jp/db/SciNetS_rib123i/crib123s1rib123u698i

Domain Annotation(A.thaliana)

http://metadb.riken.jp/db/SciNetS_rib126i/prib126u1i

• Peptidase_M24
  http://metadb.riken.jp/db/SciNetS_rib126i/crib126u1rib126u310i

RIKEN Ortholog(A.thaliana and Rice)

http://metadb.riken.jp/db/SciNetS_rib127i/prib127u1i

• At-Os_Ortholog1753
  http://metadb.riken.jp/db/SciNetS_rib127i/crib127u1rib127u1753i