AT5G25620

http://metadb.riken.jp/db/SciNetS_rib102i/crib102u0rib102u50000025620i

AT5G25620

TAIR10 Locus

status_type

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u5i

description

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u13i

• YUCCA6 (YUC6); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: auxin biosynthetic process; EXPRESSED IN: sepal; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT4G13260.1).

label

http://www.w3.org/2000/01/rdf-schema#label

• AT5G25620

attributionURL

http://creativecommons.org/ns#attributionURL

• http://arabidopsis.org/servlets/TairObject?type=locus&name=AT5G25620

locus region

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u3i

• Chr5:8935040-8938758 -
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u2rib102u24957i

gene type

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u17i

• protein_coding
  http://metadb.riken.jp/db/SciNetS_ria253i/cria253u10i

species

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u18i

• Arabidopsis thaliana
  http://metadb.riken.jp/db/SciNetS_rib166i/crib166u26rib166u3702i

seeAlso

http://www.w3.org/2000/01/rdf-schema#seeAlso

• http://database.riken.jp/sw/item/crib102u0rib102u50000025620i

synonym

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u14i

• YUCCA6
• YUC6

relationship

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u6i

TAIR10 Gene Model

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u2i

• AT5G25620.2
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u50000256202i
• AT5G25620.1
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u50000256201i

RARGE Transposon Mutant

http://metadb.riken.jp/db/SciNetS_ria10i/pria10s1i

• 52-0976-1
  http://metadb.riken.jp/db/SciNetS_ria10i/cria10s1ria10u5209761i

RAFL cDNA

http://metadb.riken.jp/db/SciNetS_ria11i/pria11s1i

• RAFL09-36-F17
  http://metadb.riken.jp/db/SciNetS_ria11i/cria11s1ria11u8618i

Swiss-Prot Plants

http://metadb.riken.jp/db/SciNetS_ria214i/pria214u4i

• YUC6_ARATH
  http://metadb.riken.jp/db/SciNetS_ria214i/cria214s6ria214u2683135059i

TAIR_gene_model (on ARTADE2DB) (ver. TAIR9)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• AT5G25620.1
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u522562001000i

TAIR によるGO注釈

http://metadb.riken.jp/db/SciNetS_ria269i/pria269u1i

• AT5G25620:has:flavin adenine dinucleotide binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u155458i
• AT5G25620:has:flavin-containing monooxygenase activity
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u155463i
• AT5G25620:has:NADP binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u155461i
• AT5G25620:involved in:oxidation-reduction process
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u155459i
• AT5G25620:has:oxidoreductase activity
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u155460i
• AT5G25620:involved in:auxin biosynthetic process
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u155462i
• AT5G25620:has:monooxygenase activity
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u155464i

TAIRによるPO注釈（生育ステージ）

http://metadb.riken.jp/db/SciNetS_ria270i/pria270u1i

• AT5G25620:expressed during:petal differentiation and expansion stage
  http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u157746i

TAIRによるPO注釈（器官名）

http://metadb.riken.jp/db/SciNetS_ria273i/pria273u1i

• AT5G25620:expressed in:sepal
  http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u167671i

A.thaliana cDNA

http://metadb.riken.jp/db/SciNetS_ria277i/pria277u2i

• NM_122473
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u37733i
• RAFL09-36-F17
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u53665i
• AY113851
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u8926i

Ds Mapping Information to TAIR10

http://metadb.riken.jp/db/SciNetS_ria278i/pria278u13i

• 52-0450-1_G-edge.1
  http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u19854i
• 52-1251-1_G-edge.1
  http://metadb.riken.jp/db/SciNetS_ria278i/cria278u2ria278u21171i

AT_TAIR_gene

http://metadb.riken.jp/db/SciNetS_rib101i/prib101s4i

• AT5G25620.1
  http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u50000256201i

RIKEN A.thaliana gene family

http://metadb.riken.jp/db/SciNetS_rib123i/prib123s1i

• Cluster217
  http://metadb.riken.jp/db/SciNetS_rib123i/crib123s1rib123u217i

RIKEN Ortholog(A.thaliana and Rice)

http://metadb.riken.jp/db/SciNetS_rib127i/prib127u1i

• At-Os_Ortholog1788
  http://metadb.riken.jp/db/SciNetS_rib127i/crib127u1rib127u1788i