A.thaliana locus
TAIR10 Locus
AT3G03710
http://metadb.riken.jp/db/SciNetS_rib102i/crib102u0rib102u30000003710i
AT3G03710(TAIR10 Locus)
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AT3G03710
TAIR10 Locus
status_type
http://metadb.riken.jp/db/SciNetS_rib102i/prib102u5i
description
http://metadb.riken.jp/db/SciNetS_rib99i/prib99u13i
resistant to inhibition with FSM 10 (RIF10); FUNCTIONS IN: polyribonucleotide nucleotidyltransferase activity, 3'-5'-exoribonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: chlorophyll biosynthetic process, cellular response to phosphate starvation, xanthophyll biosynthetic process, carotene biosynthetic process, negative regulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type (InterPro:IPR015848), K Homology (InterPro:IPR004087), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), K Homology, type 1 (InterPro:IPR004088), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Polyribonucleotide nucleotidyltransferase (InterPro:IPR012162); BEST Arabidopsis thaliana protein match is: polyribonucleotide nucleotidyltransferase, putative (TAIR:AT5G14580.1); Has 29137 Blast hits to 25785 proteins in 2865 species: Archae - 377; Bacteria - 19207; Metazoa - 333; Fungi - 67; Plants - 272; Viruses - 0; Other Eukaryotes - 8881 (source: NCBI BLink).
label
http://www.w3.org/2000/01/rdf-schema#label
AT3G03710
attributionURL
http://creativecommons.org/ns#attributionURL
http://arabidopsis.org/servlets/TairObject?type=locus&name=AT3G03710
locus region
http://metadb.riken.jp/db/SciNetS_rib102i/prib102u3i
Chr3:919542-925338 +
http://metadb.riken.jp/db/SciNetS_rib102i/crib102u2rib102u28166i
gene type
http://metadb.riken.jp/db/SciNetS_rib99i/prib99u17i
protein_coding
http://metadb.riken.jp/db/SciNetS_ria253i/cria253u10i
species
http://metadb.riken.jp/db/SciNetS_rib99i/prib99u18i
Arabidopsis thaliana
http://metadb.riken.jp/db/SciNetS_rib166i/crib166u26rib166u3702i
seeAlso
http://www.w3.org/2000/01/rdf-schema#seeAlso
http://database.riken.jp/sw/item/crib102u0rib102u30000003710i
synonym
http://metadb.riken.jp/db/SciNetS_rib99i/prib99u14i
PIGMENT DEFECTIVE 326
PDE326
POLYNUCLEOTIDE PHOSPHORYLASE
resistant to inhibition with FSM 10
RIF10
PNP
relationship
http://metadb.riken.jp/db/SciNetS_rib102i/prib102u6i
TAIR10 Gene Model
http://metadb.riken.jp/db/SciNetS_rib102i/prib102u2i
AT3G03710.1
http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u30000037101i
ARTADE2_Gene (Ver.20100511)
http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i
OMAT3P001220
http://metadb.riken.jp/db/SciNetS_ria227i/cria227s1ria227u300012200000i
TAIR_gene_model (on ARTADE2DB) (ver. TAIR9)
http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i
AT3G03710.1
http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u320371001000i
Genes with tiling-array support (Annotated)
http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i
AT3G03710.1
http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u320371001000i
TAIR によるGO注釈
http://metadb.riken.jp/db/SciNetS_ria269i/pria269u1i
AT3G03710:has:3'-5'-exoribonuclease activity
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u77089i
AT3G03710:involved in:chlorophyll biosynthetic process
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u77092i
AT3G03710:involved in:RNA catabolic process
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u77096i
AT3G03710:functions in:RNA binding
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u77094i
AT3G03710:functions in:nucleic acid binding
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u77088i
AT3G03710:involved in:xanthophyll biosynthetic process
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u77087i
AT3G03710:involved in:chloroplast RNA processing
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u77090i
AT3G03710:involved in:negative regulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u77085i
AT3G03710:involved in:cellular response to phosphate starvation
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u77095i
AT3G03710:involved in:carotene biosynthetic process
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u77093i
AT3G03710:located in:chloroplast
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u77091i
AT3G03710:located in:chloroplast stroma
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u77086i
AT3G03710:has:polyribonucleotide nucleotidyltransferase activity
http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u77084i
TAIRによるPO注釈（生育ステージ）
http://metadb.riken.jp/db/SciNetS_ria270i/pria270u1i
AT3G03710:expressed during:F mature embryo stage
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u33003i
AT3G03710:expressed during:4 anthesis
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u166998i
AT3G03710:expressed during:LP.10 ten leaves visible
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u110099i
AT3G03710:expressed during:LP.06 six leaves visible
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u136352i
AT3G03710:expressed during:LP.04 four leaves visible
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u123158i
AT3G03710:expressed during:LP.02 two leaves visible
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u97655i
AT3G03710:expressed during:C globular stage
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u46456i
AT3G03710:expressed during:4 leaf senescence stage
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u6068i
AT3G03710:expressed during:petal differentiation and expansion stage
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u150608i
AT3G03710:expressed during:LP.12 twelve leaves visible
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u73296i
AT3G03710:expressed during:E expanded cotyledon stage
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u19354i
AT3G03710:expressed during:LP.08 eight leaves visible
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u85446i
AT3G03710:expressed during:D bilateral stage
http://metadb.riken.jp/db/SciNetS_ria270i/cria270u1ria270u60209i
TAIRによるPO注釈（器官名）
http://metadb.riken.jp/db/SciNetS_ria273i/pria273u1i
AT3G03710:expressed in:pedicel
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u220105i
AT3G03710:expressed in:petal
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u176062i
AT3G03710:expressed in:inflorescence meristem
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u36784i
AT3G03710:expressed in:stem
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u206466i
AT3G03710:expressed in:stamen
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u132540i
AT3G03710:expressed in:leaf apex
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u272097i
AT3G03710:expressed in:collective leaf structure
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u286207i
AT3G03710:expressed in:guard cell
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u308420i
AT3G03710:expressed in:leaf lamina base
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u49548i
AT3G03710:expressed in:sepal
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u161003i
AT3G03710:expressed in:embryo
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u90142i
AT3G03710:expressed in:seed
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u104568i
AT3G03710:expressed in:cauline leaf
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u9518i
AT3G03710:expressed in:petiole
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u245371i
AT3G03710:expressed in:cotyledon
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u233105i
AT3G03710:expressed in:flower
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u191330i
AT3G03710:expressed in:carpel
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u146460i
AT3G03710:expressed in:hypocotyl
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u258539i
AT3G03710:expressed in:vascular leaf
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u118554i
AT3G03710:expressed in:root
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u62940i
AT3G03710:expressed in:shoot apex
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u22980i
AT3G03710:expressed in:shoot system
http://metadb.riken.jp/db/SciNetS_ria273i/cria273u1ria273u76580i
A.thaliana cDNA
http://metadb.riken.jp/db/SciNetS_ria277i/pria277u2i
NM_111242
http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u66092i
AF450480
http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u60289i
AT_TAIR_gene
http://metadb.riken.jp/db/SciNetS_rib101i/prib101s4i
AT3G03710.1
http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u30000037101i
RIKEN A.thaliana gene family
http://metadb.riken.jp/db/SciNetS_rib123i/prib123s1i
Cluster3024
http://metadb.riken.jp/db/SciNetS_rib123i/crib123s1rib123u3024i
Domain Annotation(A.thaliana)
http://metadb.riken.jp/db/SciNetS_rib126i/prib126u1i
KH_1
http://metadb.riken.jp/db/SciNetS_rib126i/crib126u1rib126u997i
PNPase
http://metadb.riken.jp/db/SciNetS_rib126i/crib126u1rib126u1983i
S1
http://metadb.riken.jp/db/SciNetS_rib126i/crib126u1rib126u463i
RNase_PH_C
http://metadb.riken.jp/db/SciNetS_rib126i/crib126u1rib126u1982i
RNase_PH
http://metadb.riken.jp/db/SciNetS_rib126i/crib126u1rib126u724i
RIKEN Ortholog(A.thaliana and Rice)
http://metadb.riken.jp/db/SciNetS_rib127i/prib127u1i
At-Os_Ortholog7699
http://metadb.riken.jp/db/SciNetS_rib127i/crib127u1rib127u7699i
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