InterProInterPro Protein Domain record

Histidine phosphatase superfamily, clade-1
http://metadb.riken.jp/db/SciNetS_rib124i/crib124s1rib124u13078i

Histidine phosphatase superfamily, clade-1

InterPro Protein Domain record

description
  • <p>The histidine phosphatase superfamily is so named because catalysiscentres on a conserved His residue that is transiently phosphorylatedduring the catalytic cycle. Other conserved residues contribute to a'phosphate pocket' and interact with the phospho group of substratebefore, during and after its transfer to the His residue. Structure andsequence analyses show that different families contribute differentadditional residues to the 'phosphate pocket' and, more surprisingly,differ in the position, in sequence and in three dimensions, of acatalytically essential acidic residue. The superfamily may be dividedinto two main branches. The relationship between the two branches isnot evident by (PSI-)BLAST but is clear from more sensitive sequencesearches and structural comparisons [<cite idref="PUB00053493"/>].</p><p>The larger branch 1 contains a wide variety of catalytic functions, thebest known being fructose 2,6-bisphosphatase (found in a bifunctionalprotein with 2-phosphofructokinase) and cofactor-dependentphosphoglycerate mutase. The latter is an unusual example of a mutaseactivity in the superfamily: the vast majority of members appear to bephosphatases. The bacterial regulatory protein phosphatase SixA is alsoin branch 1 and has a minimal, and possible ancestral-like structure,lacking the large domain insertions that contribute to binding of smallmolecules in branch 1 members.</p><p>Phosphoglycerate mutase (<db_xref db="EC" dbkey="5.4.2.1"/>) (PGAM) and bisphosphoglycerate mutase (<db_xref db="EC" dbkey="5.4.2.4"/>) (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate [<cite idref="PUB00000183"/>, <cite idref="PUB00001554"/>, <cite idref="PUB00007922"/>]. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase <db_xref db="EC" dbkey="3.1.3.13"/> activity).</p><p>In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein.</p> <p>BPGM is a dimeric protein and is found mainly in erythrocytes where it plays a major role in regulating haemoglobin oxygen affinity as a consequence of controlling 2,3-DPG concentration. The catalytic mechanism of both PGAM and BPGM involves the formation of a phosphohistidine intermediate [<cite idref="PUB00003558"/>].</p> <p> A number of other proteins including, the bifunctional enzyme 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase [<cite idref="PUB00004695"/>] that catalyses both the synthesis and the degradation of fructose-2,6-bisphosphate and bacterial alpha-ribazole-5'-phosphate phosphatase, which is involved in cobalamin biosynthesis, contain this domain [<cite idref="PUB00002873"/>].</p>
label
  • Histidine phosphatase superfamily, clade-1
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signatures_SMART
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PDB_structure
InterPro Protein Domain record
Os_RAPDB_Locus
Pfam-A