AT3G60500

http://metadb.riken.jp/db/SciNetS_rib102i/crib102u0rib102u30000060500i

AT3G60500

TAIR10 Locus

status_type

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u5i

description

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u13i

• ECERIFERUM 7 (CER7); CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: ribonuclease PH45A (TAIR:AT3G12990.3); Has 1195 Blast hits to 1195 proteins in 321 species: Archae - 243; Bacteria - 19; Metazoa - 358; Fungi - 187; Plants - 157; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink).

label

http://www.w3.org/2000/01/rdf-schema#label

• AT3G60500

attributionURL

http://creativecommons.org/ns#attributionURL

• http://arabidopsis.org/servlets/TairObject?type=locus&name=AT3G60500

locus region

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u3i

• Chr3:22353883-22356625 +
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u2rib102u28190i

gene type

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u17i

• protein_coding
  http://metadb.riken.jp/db/SciNetS_ria253i/cria253u10i

species

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u18i

• Arabidopsis thaliana
  http://metadb.riken.jp/db/SciNetS_rib166i/crib166u26rib166u3702i

seeAlso

http://www.w3.org/2000/01/rdf-schema#seeAlso

• http://database.riken.jp/sw/item/crib102u0rib102u30000060500i

synonym

http://metadb.riken.jp/db/SciNetS_rib99i/prib99u14i

• G3
• CER7
• ECERIFERUM 7

relationship

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u6i

TAIR10 Gene Model

http://metadb.riken.jp/db/SciNetS_rib102i/prib102u2i

• AT3G60500.3
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u30000605003i
• AT3G60500.1
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u30000605001i
• AT3G60500.2
  http://metadb.riken.jp/db/SciNetS_rib102i/crib102u1rib102u30000605002i

RAFL cDNA

http://metadb.riken.jp/db/SciNetS_ria11i/pria11s1i

• RAFL15-37-B06
  http://metadb.riken.jp/db/SciNetS_ria11i/cria11s1ria11u13407i

TAIR_gene_model (on ARTADE2DB) (ver. TAIR9)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• AT3G60500.2
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u326050002000i
• AT3G60500.1
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u326050001000i

Genes with tiling-array support (Annotated)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• AT3G60500.2
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u326050002000i
• AT3G60500.1
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s2ria227u326050001000i

ARTADE2_Gene (Ver.20100511)

http://metadb.riken.jp/db/SciNetS_ria227i/pria227s3i

• OMAT3P017050
  http://metadb.riken.jp/db/SciNetS_ria227i/cria227s1ria227u300170500000i

TAIR によるGO注釈

http://metadb.riken.jp/db/SciNetS_ria269i/pria269u1i

• AT3G60500:involved in:RNA processing
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u108619i
• AT3G60500:involved in:wax biosynthetic process
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u108622i
• AT3G60500:located in:cytoplasm
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u108618i
• AT3G60500:located in:nucleus
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u108621i
• AT3G60500:has:3'-5'-exoribonuclease activity
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u108617i
• AT3G60500:has:RNA binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u108620i
• AT3G60500:functions in:RNA binding
  http://metadb.riken.jp/db/SciNetS_ria269i/cria269s1ria269u108616i

A.thaliana cDNA

http://metadb.riken.jp/db/SciNetS_ria277i/pria277u2i

• NM_115914
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u70278i
• BT005701
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u63300i
• NM_202737
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u71224i
• RAFL15-37-B06
  http://metadb.riken.jp/db/SciNetS_ria277i/cria277u1ria277u73272i

AT_TAIR_gene

http://metadb.riken.jp/db/SciNetS_rib101i/prib101s4i

• AT3G60500.2
  http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u30000605002i
• AT3G60500.1
  http://metadb.riken.jp/db/SciNetS_rib101i/crib101u0rib101u30000605001i

RIKEN A.thaliana gene family

http://metadb.riken.jp/db/SciNetS_rib123i/prib123s1i

• Cluster2844
  http://metadb.riken.jp/db/SciNetS_rib123i/crib123s1rib123u2844i

Domain Annotation(A.thaliana)

http://metadb.riken.jp/db/SciNetS_rib126i/prib126u1i

• RNase_PH
  http://metadb.riken.jp/db/SciNetS_rib126i/crib126u1rib126u724i
• RNase_PH_C
  http://metadb.riken.jp/db/SciNetS_rib126i/crib126u1rib126u1982i

RIKEN Ortholog(A.thaliana and Rice)

http://metadb.riken.jp/db/SciNetS_rib127i/prib127u1i

• At-Os_Ortholog2099
  http://metadb.riken.jp/db/SciNetS_rib127i/crib127u1rib127u2099i